Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.57□□□□□ -2.32
CNOT1A5YKK6 AC006001.4-201ENST00000622243 395 ntBASIC0.57□□□□□ -2.32
CNOT1A5YKK6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CNOT1A5YKK6 RNA5SP368-201ENST00000364298 116 ntBASIC0.57□□□□□ -2.32
CNOT1A5YKK6 RNU6-1074P-201ENST00000383995 104 ntBASIC0.57□□□□□ -2.32
CNOT1A5YKK6 AL356131.1-201ENST00000405826 414 ntBASIC0.57□□□□□ -2.32
CNOT1A5YKK6 RN7SKP61-201ENST00000410642 295 ntBASIC0.57□□□□□ -2.32
CNOT1A5YKK6 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.57□□□□□ -2.32
CNOT1A5YKK6 AP001025.1-201ENST00000486139 332 ntBASIC0.57□□□□□ -2.32
CNOT1A5YKK6 AC021146.2-201ENST00000504736 556 ntBASIC0.57□□□□□ -2.32
CNOT1A5YKK6 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.57□□□□□ -2.32
CNOT1A5YKK6 AC092470.1-201ENST00000546187 132 ntBASIC0.57□□□□□ -2.32
CNOT1A5YKK6 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CNOT1A5YKK6 U6.48-201ENST00000618523 106 ntBASIC0.57□□□□□ -2.32
CNOT1A5YKK6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC0.57□□□□□ -2.32
CNOT1A5YKK6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.57□□□□□ -2.32
CNOT1A5YKK6 RNU6-1155P-201ENST00000363554 107 ntBASIC0.56□□□□□ -2.32
CNOT1A5YKK6 AC092393.1-201ENST00000439625 742 ntBASIC0.56□□□□□ -2.32
CNOT1A5YKK6 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.56□□□□□ -2.32
CNOT1A5YKK6 UBE2Q2P9-201ENST00000490086 202 ntBASIC0.56□□□□□ -2.32
CNOT1A5YKK6 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.56□□□□□ -2.32
CNOT1A5YKK6 RNA5SP67-201ENST00000516422 131 ntBASIC0.56□□□□□ -2.32
CNOT1A5YKK6 AC004923.2-201ENST00000529649 369 ntBASIC0.56□□□□□ -2.32
CNOT1A5YKK6 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.56□□□□□ -2.32
CNOT1A5YKK6 AL355802.3-201ENST00000607571 545 ntBASIC0.56□□□□□ -2.32
CNOT1A5YKK6 AP000238.1-201ENST00000608759 426 ntBASIC0.56□□□□□ -2.32
CNOT1A5YKK6 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.56□□□□□ -2.32
CNOT1A5YKK6 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
CNOT1A5YKK6 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
CNOT1A5YKK6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
CNOT1A5YKK6 RNU5D-1-201ENST00000363299 116 ntBASIC0.56□□□□□ -2.32
CNOT1A5YKK6 RNU6-923P-201ENST00000364753 107 ntBASIC0.56□□□□□ -2.32
CNOT1A5YKK6 RNU6-821P-201ENST00000390995 107 ntBASIC0.56□□□□□ -2.32
CNOT1A5YKK6 SNX3P1X-201ENST00000414887 175 ntBASIC0.56□□□□□ -2.32
CNOT1A5YKK6 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.56□□□□□ -2.32
CNOT1A5YKK6 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.56□□□□□ -2.32
CNOT1A5YKK6 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC0.56□□□□□ -2.32
CNOT1A5YKK6 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.56□□□□□ -2.32
CNOT1A5YKK6 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.56□□□□□ -2.32
CNOT1A5YKK6 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.56□□□□□ -2.32
CNOT1A5YKK6 AC087481.2-201ENST00000565492 330 ntBASIC0.56□□□□□ -2.32
CNOT1A5YKK6 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.56□□□□□ -2.32
CNOT1A5YKK6 MIR3126-201ENST00000577443 74 ntBASIC0.56□□□□□ -2.32
CNOT1A5YKK6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.56□□□□□ -2.32
CNOT1A5YKK6 XIAPP1-201ENST00000603162 600 ntBASIC0.56□□□□□ -2.32
CNOT1A5YKK6 RPL21P136-201ENST00000605378 396 ntBASIC0.56□□□□□ -2.32
CNOT1A5YKK6 FRG1HP-204ENST00000617940 757 ntBASIC0.56□□□□□ -2.32
CNOT1A5YKK6 AL049737.1-201ENST00000413920 1403 ntBASIC0.56□□□□□ -2.32
CNOT1A5YKK6 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
CNOT1A5YKK6 Y_RNA.185-201ENST00000363894 100 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 Y_RNA.572-201ENST00000384757 98 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 RNU6-733P-201ENST00000410759 104 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 AC093106.2-201ENST00000428212 385 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.55□□□□□ -2.32
CNOT1A5YKK6 AL591043.1-201ENST00000432461 424 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 MTND5P14-201ENST00000441481 1267 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 RPL31P60-201ENST00000478450 367 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.55□□□□□ -2.32
CNOT1A5YKK6 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.55□□□□□ -2.32
CNOT1A5YKK6 AP003355.1-201ENST00000518956 587 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 OR5B19P-201ENST00000531766 928 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.55□□□□□ -2.32
CNOT1A5YKK6 MIR4514-201ENST00000581410 57 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 RSL24D1P11-201ENST00000591045 491 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 BNIP3P25-201ENST00000596023 559 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 uc_338.14-201ENST00000613162 166 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 AC097372.4-201ENST00000625025 466 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
CNOT1A5YKK6 RNU6-1249P-201ENST00000363237 111 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 SNORA8-201ENST00000384574 139 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
CNOT1A5YKK6 AC096920.1-201ENST00000423991 241 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.55□□□□□ -2.32
CNOT1A5YKK6 RNU7-23P-201ENST00000459465 62 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 CBX3P3-201ENST00000508108 532 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 SNORA62.5-201ENST00000516634 120 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 HAUS1P3-201ENST00000523909 662 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 MIR3921-201ENST00000577308 85 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 AC008751.2-201ENST00000597885 980 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.55□□□□□ -2.32
CNOT1A5YKK6 AC097372.5-201ENST00000623665 376 ntBASIC0.55□□□□□ -2.32
CNOT1A5YKK6 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.54□□□□□ -2.32
CNOT1A5YKK6 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
CNOT1A5YKK6 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.54□□□□□ -2.32
CNOT1A5YKK6 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.54□□□□□ -2.32
CNOT1A5YKK6 MED14P1-201ENST00000430517 648 ntBASIC0.54□□□□□ -2.32
CNOT1A5YKK6 snoU13.11-201ENST00000459219 104 ntBASIC0.54□□□□□ -2.32
CNOT1A5YKK6 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.54□□□□□ -2.32
CNOT1A5YKK6 SNORA70.16-201ENST00000516390 95 ntBASIC0.54□□□□□ -2.32
CNOT1A5YKK6 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.54□□□□□ -2.32
CNOT1A5YKK6 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.54□□□□□ -2.32
CNOT1A5YKK6 RRN3P3-201ENST00000549207 578 ntBASIC0.54□□□□□ -2.32
CNOT1A5YKK6 SNORD95.1-201ENST00000364099 68 ntBASIC0.54□□□□□ -2.32
CNOT1A5YKK6 MTCYBP3-201ENST00000445588 1137 ntBASIC0.54□□□□□ -2.32
CNOT1A5YKK6 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.54□□□□□ -2.32
CNOT1A5YKK6 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.53□□□□□ -2.32
CNOT1A5YKK6 SNORA40.19-201ENST00000390846 128 ntBASIC0.53□□□□□ -2.32
CNOT1A5YKK6 SSR1P1-201ENST00000407630 814 ntBASIC0.53□□□□□ -2.32
CNOT1A5YKK6 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.53□□□□□ -2.32
CNOT1A5YKK6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms