Protein–RNA interactions for Protein: A4UGR9

XIRP2, Xin actin-binding repeat-containing protein 2, humanhuman

Predictions only

Length 3,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2A4UGR9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.06□□□□□ -2.4
XIRP2A4UGR9 RNU6-1077P-201ENST00000410506 102 ntBASIC0.06□□□□□ -2.4
XIRP2A4UGR9 RNU2-64P-201ENST00000411315 191 ntBASIC0.06□□□□□ -2.4
XIRP2A4UGR9 AL589880.1-201ENST00000448271 287 ntBASIC0.06□□□□□ -2.4
XIRP2A4UGR9 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.06□□□□□ -2.4
XIRP2A4UGR9 AC239798.3-201ENST00000454459 408 ntBASIC0.06□□□□□ -2.4
XIRP2A4UGR9 SCARNA11.3-201ENST00000517276 130 ntBASIC0.06□□□□□ -2.4
XIRP2A4UGR9 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.06□□□□□ -2.4
XIRP2A4UGR9 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
XIRP2A4UGR9 MIR4422-201ENST00000581938 83 ntBASIC0.06□□□□□ -2.4
XIRP2A4UGR9 AP001269.3-201ENST00000588718 329 ntBASIC0.06□□□□□ -2.4
XIRP2A4UGR9 DUXAP10-204ENST00000612052 616 ntBASIC0.06□□□□□ -2.4
XIRP2A4UGR9 FRG1HP-204ENST00000617940 757 ntBASIC0.06□□□□□ -2.4
XIRP2A4UGR9 RNU6-50P-201ENST00000362356 103 ntBASIC0.06□□□□□ -2.4
XIRP2A4UGR9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.06□□□□□ -2.4
XIRP2A4UGR9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC0.06□□□□□ -2.4
XIRP2A4UGR9 RNU6-920P-201ENST00000410926 92 ntBASIC0.06□□□□□ -2.4
XIRP2A4UGR9 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.06□□□□□ -2.4
XIRP2A4UGR9 MTND4LP11-201ENST00000422184 280 ntBASIC0.06□□□□□ -2.4
XIRP2A4UGR9 AC013410.2-201ENST00000422627 201 ntBASIC0.06□□□□□ -2.4
XIRP2A4UGR9 AC119618.1-201ENST00000434191 222 ntBASIC0.06□□□□□ -2.4
XIRP2A4UGR9 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC0.06□□□□□ -2.4
XIRP2A4UGR9 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.06□□□□□ -2.4
XIRP2A4UGR9 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.06□□□□□ -2.4
XIRP2A4UGR9 RNU6-362P-201ENST00000516736 90 ntBASIC0.06□□□□□ -2.4
XIRP2A4UGR9 SNORA31.18-201ENST00000517043 134 ntBASIC0.06□□□□□ -2.4
XIRP2A4UGR9 RNU6-889P-201ENST00000517189 103 ntBASIC0.06□□□□□ -2.4
XIRP2A4UGR9 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.06□□□□□ -2.4
XIRP2A4UGR9 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.06□□□□□ -2.4
XIRP2A4UGR9 RNU6-654P-201ENST00000364373 107 ntBASIC0.05□□□□□ -2.4
XIRP2A4UGR9 Y_RNA.551-201ENST00000384661 102 ntBASIC0.05□□□□□ -2.4
XIRP2A4UGR9 AL356421.1-201ENST00000403255 413 ntBASIC0.05□□□□□ -2.4
XIRP2A4UGR9 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.05□□□□□ -2.4
XIRP2A4UGR9 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC0.05□□□□□ -2.4
XIRP2A4UGR9 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.05□□□□□ -2.4
XIRP2A4UGR9 AL513343.1-201ENST00000451818 792 ntBASIC0.05□□□□□ -2.4
XIRP2A4UGR9 AC115085.1-201ENST00000588924 229 ntBASIC0.05□□□□□ -2.4
XIRP2A4UGR9 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
XIRP2A4UGR9 AC145146.1-201ENST00000496370 254 ntBASIC0.05□□□□□ -2.4
XIRP2A4UGR9 AC108120.2-201ENST00000512973 294 ntBASIC0.05□□□□□ -2.4
XIRP2A4UGR9 RNA5SP404-201ENST00000517118 132 ntBASIC0.05□□□□□ -2.4
XIRP2A4UGR9 AC025165.5-201ENST00000602802 578 ntBASIC0.05□□□□□ -2.4
XIRP2A4UGR9 SDAD1P2-201ENST00000441308 2028 ntBASIC0.05□□□□□ -2.4
XIRP2A4UGR9 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
XIRP2A4UGR9 Y_RNA.495-201ENST00000384435 112 ntBASIC0.04□□□□□ -2.4
XIRP2A4UGR9 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.04□□□□□ -2.4
XIRP2A4UGR9 AC025465.4-201ENST00000513422 638 ntBASIC0.04□□□□□ -2.4
XIRP2A4UGR9 IGKV1-22-201ENST00000524313 326 ntBASIC0.04□□□□□ -2.4
XIRP2A4UGR9 AC019288.1-201ENST00000557918 224 ntBASIC0.04□□□□□ -2.4
XIRP2A4UGR9 AC123786.2-201ENST00000603459 275 ntBASIC0.04□□□□□ -2.4
XIRP2A4UGR9 AC130454.1-201ENST00000622948 401 ntBASIC0.04□□□□□ -2.4
XIRP2A4UGR9 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC0.04□□□□□ -2.4
XIRP2A4UGR9 RNU6-1222P-201ENST00000384615 107 ntBASIC0.04□□□□□ -2.4
XIRP2A4UGR9 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.04□□□□□ -2.4
XIRP2A4UGR9 CCNG1P1-201ENST00000406783 885 ntBASIC0.04□□□□□ -2.4
XIRP2A4UGR9 AL049830.1-201ENST00000468034 425 ntBASIC0.04□□□□□ -2.4
XIRP2A4UGR9 RPS26P45-201ENST00000471748 340 ntBASIC0.04□□□□□ -2.4
XIRP2A4UGR9 HMGB1P36-201ENST00000487709 576 ntBASIC0.04□□□□□ -2.4
XIRP2A4UGR9 SMARCE1P4-201ENST00000523647 241 ntBASIC0.04□□□□□ -2.4
XIRP2A4UGR9 MIR4661-201ENST00000582720 75 ntBASIC0.04□□□□□ -2.4
XIRP2A4UGR9 AC069277.2-201ENST00000454211 432 ntBASIC0.03□□□□□ -2.4
XIRP2A4UGR9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.03□□□□□ -2.4
XIRP2A4UGR9 MIR5093-201ENST00000583199 100 ntBASIC0.03□□□□□ -2.4
XIRP2A4UGR9 MTCO2P2-201ENST00000591258 225 ntBASIC0.03□□□□□ -2.4
XIRP2A4UGR9 AC040174.2-201ENST00000602701 465 ntBASIC0.03□□□□□ -2.4
XIRP2A4UGR9 AL161423.1-201ENST00000613700 262 ntBASIC0.03□□□□□ -2.4
XIRP2A4UGR9 AL356585.4-201ENST00000623078 1229 ntBASIC0.03□□□□□ -2.4
XIRP2A4UGR9 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.03□□□□□ -2.4
XIRP2A4UGR9 RPL21P47-201ENST00000483696 477 ntBASIC0.03□□□□□ -2.4
XIRP2A4UGR9 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.03□□□□□ -2.4
XIRP2A4UGR9 AC025594.3-201ENST00000613068 790 ntBASIC0.03□□□□□ -2.4
XIRP2A4UGR9 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.03□□□□□ -2.4
XIRP2A4UGR9 U3.9-201ENST00000363823 204 ntBASIC0.03□□□□□ -2.41
XIRP2A4UGR9 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.03□□□□□ -2.41
XIRP2A4UGR9 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.03□□□□□ -2.41
XIRP2A4UGR9 AC099513.1-201ENST00000490423 301 ntBASIC0.03□□□□□ -2.41
XIRP2A4UGR9 COX7A2P2-201ENST00000505291 250 ntBASIC0.03□□□□□ -2.41
XIRP2A4UGR9 RNU6-1334P-201ENST00000516032 105 ntBASIC0.03□□□□□ -2.41
XIRP2A4UGR9 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.03□□□□□ -2.41
XIRP2A4UGR9 U4.2-201ENST00000618561 85 ntBASIC0.03□□□□□ -2.41
XIRP2A4UGR9 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
XIRP2A4UGR9 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.02□□□□□ -2.41
XIRP2A4UGR9 CR769776.1-201ENST00000441254 787 ntBASIC0.02□□□□□ -2.41
XIRP2A4UGR9 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC0.02□□□□□ -2.41
XIRP2A4UGR9 AP005902.1-201ENST00000521358 186 ntBASIC0.02□□□□□ -2.41
XIRP2A4UGR9 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.02□□□□□ -2.41
XIRP2A4UGR9 AC005668.1-201ENST00000571142 476 ntBASIC0.02□□□□□ -2.41
XIRP2A4UGR9 SNORD14A-201ENST00000606526 91 ntBASIC0.02□□□□□ -2.41
XIRP2A4UGR9 SSR1P1-201ENST00000407630 814 ntBASIC0.02□□□□□ -2.41
XIRP2A4UGR9 RNA5SP451-201ENST00000410588 110 ntBASIC0.02□□□□□ -2.41
XIRP2A4UGR9 PAXBP1P1-201ENST00000449315 447 ntBASIC0.02□□□□□ -2.41
XIRP2A4UGR9 NDUFB4P10-201ENST00000452541 359 ntBASIC0.02□□□□□ -2.41
XIRP2A4UGR9 AC010301.1-201ENST00000473936 355 ntBASIC0.02□□□□□ -2.41
XIRP2A4UGR9 ACA64.5-201ENST00000516207 127 ntBASIC0.02□□□□□ -2.41
XIRP2A4UGR9 RN7SKP287-201ENST00000516546 266 ntBASIC0.02□□□□□ -2.41
XIRP2A4UGR9 RNU7-193P-201ENST00000516723 65 ntBASIC0.02□□□□□ -2.41
XIRP2A4UGR9 LLPHP1-201ENST00000603571 367 ntBASIC0.02□□□□□ -2.41
XIRP2A4UGR9 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.02□□□□□ -2.41
XIRP2A4UGR9 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.02□□□□□ -2.41
XIRP2A4UGR9 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms