Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AL030996.1-201ENST00000411430 235 ntBASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 RPL31P12-201ENST00000422587 358 ntBASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 AL590664.1-201ENST00000448065 339 ntBASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 AL136097.1-201ENST00000456945 913 ntBASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 RNU7-170P-201ENST00000459303 61 ntBASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 AC008571.1-201ENST00000467232 300 ntBASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 RN7SL323P-201ENST00000494712 295 ntBASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 AK3P2-201ENST00000507976 429 ntBASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 MTCYBP40-201ENST00000509390 1135 ntBASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 AC021146.3-201ENST00000511911 260 ntBASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 AC026782.1-201ENST00000512952 449 ntBASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 AC011602.1-201ENST00000546484 331 ntBASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 AC103996.1-201ENST00000555468 102 ntBASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 MIR3609-201ENST00000582661 80 ntBASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 AP000654.2-201ENST00000605633 586 ntBASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 AL161629.2-201ENST00000615347 275 ntBASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 AC092608.2-201ENST00000624427 218 ntBASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC163A0A0D9SF12 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 Y_RNA.132-201ENST00000363421 102 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 RNU6-270P-201ENST00000364131 105 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 RNU5E-7P-201ENST00000365290 117 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 SNORA5A-201ENST00000384111 134 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 Y_RNA.445-201ENST00000384168 102 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 MIR30B-201ENST00000384850 88 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 AL590004.1-201ENST00000405321 300 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 RNU6-1077P-201ENST00000410506 102 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 RNU6-325P-201ENST00000411132 105 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 AC091286.1-201ENST00000431233 461 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 ABCF2P2-201ENST00000450549 296 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 HMGB3P22-202ENST00000451823 572 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 RPL26P9-201ENST00000457466 433 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 MIR2053-201ENST00000459295 91 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 RNU6-1037P-201ENST00000459571 107 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 RPL29P14-201ENST00000495837 428 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 RNU6-377P-201ENST00000515965 102 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 RNU6-703P-201ENST00000516946 107 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 CYCSP39-201ENST00000565821 309 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 AC020895.1-201ENST00000595362 272 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 HSPE1P7-201ENST00000604681 321 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 AC012468.1-201ENST00000604888 430 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 AL080274.1-201ENST00000605565 220 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 AC096577.2-201ENST00000611455 153 ntBASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CCDC163A0A0D9SF12 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 AC073346.2-201ENST00000624724 2058 ntBASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 RPL9P7-201ENST00000330965 580 ntBASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 RNU6-778P-201ENST00000363269 103 ntBASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 RNA5SP72-201ENST00000364442 117 ntBASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 RNA5SP22-201ENST00000365393 109 ntBASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 Y_RNA.404-201ENST00000383978 102 ntBASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 RNU6-331P-201ENST00000384724 107 ntBASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 RNU1-101P-201ENST00000391171 127 ntBASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 RPL21P17-201ENST00000397467 475 ntBASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 MIR888-201ENST00000401186 77 ntBASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 RPL26P27-201ENST00000414397 437 ntBASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 RPS15AP10-201ENST00000432472 382 ntBASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 AL513043.1-201ENST00000439124 535 ntBASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 FTH1P25-201ENST00000447665 469 ntBASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 MTATP6P7-201ENST00000453315 681 ntBASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 RPL9P9-202ENST00000466501 579 ntBASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 AC113155.1-201ENST00000511141 769 ntBASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC163A0A0D9SF12 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms