Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 HMGB1P18-201ENST00000438801 619 ntBASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 MTCO1P53-201ENST00000441633 699 ntBASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 MTCO3P45-201ENST00000443036 613 ntBASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 AC079776.3-201ENST00000450665 370 ntBASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 AC140059.1-201ENST00000489238 361 ntBASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 AC021146.2-201ENST00000504736 556 ntBASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 AC117532.1-201ENST00000514638 323 ntBASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 RNU6-583P-201ENST00000516012 92 ntBASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 SNORA31.24-201ENST00000517232 57 ntBASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 AP004607.1-201ENST00000524456 203 ntBASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 BNIP3P25-201ENST00000596023 559 ntBASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 AL713866.2-201ENST00000603579 219 ntBASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 BNIP3P10-201ENST00000605360 577 ntBASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 MIR7974-201ENST00000615835 79 ntBASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 NACAP2-201ENST00000318548 624 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 AL161781.1-201ENST00000354277 403 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 MIR126-201ENST00000362291 85 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 U8.1-201ENST00000362843 134 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 RNU6-468P-201ENST00000384003 109 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 MIR1283-2-201ENST00000408621 87 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 AC009310.1-201ENST00000414414 451 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 MTCO1P3-201ENST00000429327 192 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 RSL24D1P8-201ENST00000434442 492 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 AL096829.2-201ENST00000446582 742 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 KATNBL1P6-201ENST00000453433 915 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 Y_RNA.638-201ENST00000459374 113 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 RPL7P43-201ENST00000478876 753 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 HMGB1P28-201ENST00000507778 552 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 AC108729.3-201ENST00000513484 108 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 SNORA4.4-201ENST00000515921 135 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 MTCO3P15-201ENST00000526563 574 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 GNAI2P1-201ENST00000541815 315 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 AL121821.2-201ENST00000556081 394 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 SEPT7P9-203ENST00000604116 343 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 AC016727.1-205ENST00000605437 569 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 AC026741.1-201ENST00000605892 482 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 RNU6-91P-201ENST00000607774 107 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 AC023158.2-201ENST00000614876 543 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 MIR6134-201ENST00000617606 109 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 AC013470.4-201ENST00000619978 986 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 Z99571.1-201ENST00000636677 394 ntBASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.11□□□□□ -2.23
TRAV3A0A0B4J244 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 RNU6-97P-201ENST00000363387 104 ntBASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 RNU6-1207P-201ENST00000384343 107 ntBASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 RNU6-114P-201ENST00000384704 105 ntBASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 RPL18AP17-201ENST00000455326 198 ntBASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 BX322784.1-201ENST00000455793 1077 ntBASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 RPL36AP48-201ENST00000485521 314 ntBASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 MTCYBP35-201ENST00000503630 1137 ntBASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 RNU6-991P-201ENST00000516168 107 ntBASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 AC012213.3-201ENST00000577199 777 ntBASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 SNRPGP17-201ENST00000603780 214 ntBASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 AP005229.2-201ENST00000609980 697 ntBASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.1□□□□□ -2.23
TRAV3A0A0B4J244 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.09□□□□□ -2.23
TRAV3A0A0B4J244 MIR378A-201ENST00000362177 66 ntBASIC1.09□□□□□ -2.23
TRAV3A0A0B4J244 RNU6-188P-201ENST00000364207 107 ntBASIC1.09□□□□□ -2.23
TRAV3A0A0B4J244 FO393414.1-201ENST00000428697 1184 ntBASIC1.09□□□□□ -2.23
TRAV3A0A0B4J244 USP9YP24-201ENST00000434374 697 ntBASIC1.09□□□□□ -2.23
TRAV3A0A0B4J244 AL353706.1-201ENST00000436728 494 ntBASIC1.09□□□□□ -2.23
TRAV3A0A0B4J244 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
TRAV3A0A0B4J244 AL163540.1-201ENST00000485382 386 ntBASIC1.09□□□□□ -2.23
TRAV3A0A0B4J244 RPS15AP36-201ENST00000492022 382 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms