Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 RNU6-91P-201ENST00000607774 107 ntBASIC3.3□□□□□ -1.88
PCDHGB3Q9Y5G1 AC069200.1-201ENST00000609511 323 ntBASIC3.3□□□□□ -1.88
PCDHGB3Q9Y5G1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGB3Q9Y5G1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.3□□□□□ -1.88
PCDHGB3Q9Y5G1 U4.5-201ENST00000617137 123 ntBASIC3.3□□□□□ -1.88
PCDHGB3Q9Y5G1 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGB3Q9Y5G1 AC006020.1-201ENST00000420179 1854 ntBASIC3.3□□□□□ -1.88
PCDHGB3Q9Y5G1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHGB3Q9Y5G1 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
PCDHGB3Q9Y5G1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AL355596.1-201ENST00000565399 3996 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 SNORD14B-201ENST00000364533 90 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 Y_RNA.399-201ENST00000383955 105 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 RNU6-1215P-201ENST00000384441 102 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 MIR183-201ENST00000384958 110 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 RNU6-903P-201ENST00000391270 109 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AC068050.1-201ENST00000394891 380 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AL591416.1-201ENST00000404015 867 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 RNU6-607P-201ENST00000411283 108 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 SAR1AP4-201ENST00000429225 591 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AL606489.2-201ENST00000433886 234 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AC016691.1-201ENST00000441321 413 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 PRSS3P4-201ENST00000453323 162 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 RBMY2UP-201ENST00000453474 324 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 RN7SL293P-201ENST00000481765 281 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 RNU6-314P-201ENST00000516574 104 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 RNU6-1178P-201ENST00000516674 107 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AP004607.1-201ENST00000524456 203 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AC022880.1-201ENST00000534017 973 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AL512360.1-201ENST00000555346 234 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AC027807.1-201ENST00000559921 996 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 HMGB1P33-201ENST00000563485 527 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AC092325.1-201ENST00000566449 554 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 LRRC37A5P-203ENST00000580181 585 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 MIR4506-201ENST00000584693 77 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AC091152.3-201ENST00000604227 325 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AC122108.2-201ENST00000611946 526 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AC012314.7-201ENST00000619693 93 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 AC098679.4-201ENST00000624241 654 ntBASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHGB3Q9Y5G1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 Y_RNA.3-201ENST00000362331 103 ntBASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 RNU6-715P-201ENST00000365204 103 ntBASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 SNORA70.4-201ENST00000365509 134 ntBASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 SNORA75B-201ENST00000384053 137 ntBASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 RNU6-393P-201ENST00000384475 107 ntBASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 SNORD37.1-201ENST00000390968 65 ntBASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 AC093578.1-201ENST00000415219 368 ntBASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 RPL23AP22-201ENST00000437556 453 ntBASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 AL513043.1-201ENST00000439124 535 ntBASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 AC073415.1-201ENST00000449240 153 ntBASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 FDX1P2-201ENST00000450769 375 ntBASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 AL118520.1-201ENST00000450770 291 ntBASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 RN7SL442P-201ENST00000473804 320 ntBASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 AC011005.2-201ENST00000487324 359 ntBASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 GZMAP1-201ENST00000503054 631 ntBASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 AC116655.1-201ENST00000508324 901 ntBASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 AC009646.1-201ENST00000510455 318 ntBASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 OR5B10P-201ENST00000532869 642 ntBASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 HIF1AP1-201ENST00000553642 175 ntBASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGB3Q9Y5G1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms