Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 AL049714.1-201ENST00000466686 347 ntBASIC1.75□□□□□ -2.13
SHANK1Q9Y566 BZW1P2-201ENST00000473537 826 ntBASIC1.75□□□□□ -2.13
SHANK1Q9Y566 RPS3AP22-201ENST00000488297 769 ntBASIC1.75□□□□□ -2.13
SHANK1Q9Y566 AC005840.1-201ENST00000498412 377 ntBASIC1.75□□□□□ -2.13
SHANK1Q9Y566 AC104685.1-201ENST00000502445 371 ntBASIC1.75□□□□□ -2.13
SHANK1Q9Y566 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.75□□□□□ -2.13
SHANK1Q9Y566 ARL2BPP4-201ENST00000506854 471 ntBASIC1.75□□□□□ -2.13
SHANK1Q9Y566 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.75□□□□□ -2.13
SHANK1Q9Y566 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.75□□□□□ -2.13
SHANK1Q9Y566 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.75□□□□□ -2.13
SHANK1Q9Y566 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.75□□□□□ -2.13
SHANK1Q9Y566 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.75□□□□□ -2.13
SHANK1Q9Y566 MIR3146-201ENST00000580367 79 ntBASIC1.75□□□□□ -2.13
SHANK1Q9Y566 UBE2L4-201ENST00000587688 464 ntBASIC1.75□□□□□ -2.13
SHANK1Q9Y566 Z99497.2-201ENST00000603634 310 ntBASIC1.75□□□□□ -2.13
SHANK1Q9Y566 AC008962.1-201ENST00000605729 304 ntBASIC1.75□□□□□ -2.13
SHANK1Q9Y566 AC068276.1-201ENST00000605793 379 ntBASIC1.75□□□□□ -2.13
SHANK1Q9Y566 AC135507.1-201ENST00000607214 561 ntBASIC1.75□□□□□ -2.13
SHANK1Q9Y566 AC091965.4-201ENST00000607691 587 ntBASIC1.75□□□□□ -2.13
SHANK1Q9Y566 AC013562.2-201ENST00000611632 603 ntBASIC1.75□□□□□ -2.13
SHANK1Q9Y566 SNHG22-203ENST00000617833 660 ntBASIC1.75□□□□□ -2.13
SHANK1Q9Y566 AL589994.2-201ENST00000621124 579 ntBASIC1.75□□□□□ -2.13
SHANK1Q9Y566 AL158801.5-201ENST00000623123 465 ntBASIC1.75□□□□□ -2.13
SHANK1Q9Y566 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.75□□□□□ -2.13
SHANK1Q9Y566 AC005832.2-201ENST00000538921 1430 ntBASIC1.75□□□□□ -2.13
SHANK1Q9Y566 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
SHANK1Q9Y566 MTND4P4-201ENST00000439033 1366 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.74□□□□□ -2.13
SHANK1Q9Y566 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.74□□□□□ -2.13
SHANK1Q9Y566 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.74□□□□□ -2.13
SHANK1Q9Y566 RNU6-799P-201ENST00000363567 107 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 SNORD116-9-201ENST00000384000 95 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 SNORD116-3-201ENST00000384287 95 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 SNORD116-7-201ENST00000384404 95 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 SNORD116-5-201ENST00000384462 95 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 HMGB3P2-201ENST00000411913 584 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 AC008850.1-201ENST00000427546 362 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 MTATP6P17-201ENST00000431030 672 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 AC005094.1-201ENST00000440420 368 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 KATNBL1P3-201ENST00000443475 909 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 MTND6P13-201ENST00000443510 523 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 MTATP6P26-201ENST00000445926 662 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 TPT1P14-201ENST00000448018 505 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 EPS15P1-201ENST00000448836 336 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.74□□□□□ -2.13
SHANK1Q9Y566 RPS20P20-201ENST00000460498 340 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 AP000797.1-201ENST00000478870 387 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.74□□□□□ -2.13
SHANK1Q9Y566 AC108078.2-201ENST00000510750 236 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SHANK1Q9Y566 MTCO2P4-201ENST00000517968 247 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.74□□□□□ -2.13
SHANK1Q9Y566 OSBPL9P5-201ENST00000542581 171 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.74□□□□□ -2.13
SHANK1Q9Y566 MTND3P12-201ENST00000559068 328 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.74□□□□□ -2.13
SHANK1Q9Y566 HMGN1P30-201ENST00000589286 268 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.74□□□□□ -2.13
SHANK1Q9Y566 AC107214.2-201ENST00000608204 634 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 AL391813.2-201ENST00000609113 322 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 AC009878.1-201ENST00000621819 340 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 AC068057.2-201ENST00000624047 895 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SHANK1Q9Y566 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SHANK1Q9Y566 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
SHANK1Q9Y566 RNA5SP190-201ENST00000365222 118 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 DEFB109C-201ENST00000382575 264 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 DEFB109B-201ENST00000382656 264 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 Y_RNA.560-201ENST00000384689 102 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 MIR499A-201ENST00000384903 122 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 AL359634.1-202ENST00000404721 284 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 RNU2-39P-201ENST00000410604 198 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 PPP1R11P2-201ENST00000423543 382 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 RPL23AP7-203ENST00000449021 469 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.74□□□□□ -2.13
SHANK1Q9Y566 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.74□□□□□ -2.13
SHANK1Q9Y566 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.74□□□□□ -2.13
SHANK1Q9Y566 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.74□□□□□ -2.13
SHANK1Q9Y566 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.74□□□□□ -2.13
SHANK1Q9Y566 RNU1-40P-201ENST00000516816 164 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 RNU1-97P-201ENST00000516872 164 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.74□□□□□ -2.13
SHANK1Q9Y566 AC087373.1-201ENST00000524920 491 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.74□□□□□ -2.13
SHANK1Q9Y566 AC124947.2-202ENST00000552735 133 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 OR4K8P-201ENST00000578842 1048 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 Y_RNA.783-201ENST00000613546 102 ntBASIC1.74□□□□□ -2.13
SHANK1Q9Y566 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SHANK1Q9Y566 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
SHANK1Q9Y566 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.73□□□□□ -2.13
SHANK1Q9Y566 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SHANK1Q9Y566 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.73□□□□□ -2.13
SHANK1Q9Y566 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SHANK1Q9Y566 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
SHANK1Q9Y566 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
SHANK1Q9Y566 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
SHANK1Q9Y566 RNU5E-8P-201ENST00000363502 116 ntBASIC1.73□□□□□ -2.13
SHANK1Q9Y566 SNORD116-2-201ENST00000384274 95 ntBASIC1.73□□□□□ -2.13
SHANK1Q9Y566 SNORD116-6-201ENST00000384711 96 ntBASIC1.73□□□□□ -2.13
SHANK1Q9Y566 MIR135A2-201ENST00000384854 100 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms