Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 SNORA24.1-201ENST00000384401 135 ntBASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 RN7SKP140-201ENST00000411196 284 ntBASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 AC114491.1-201ENST00000416095 246 ntBASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 AL139413.1-201ENST00000421309 217 ntBASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 HMGB1P27-201ENST00000431429 603 ntBASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 AC092798.1-201ENST00000458542 409 ntBASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 AC108078.2-201ENST00000510750 236 ntBASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 RNA5SP356-201ENST00000515972 94 ntBASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 RNU6-1282P-201ENST00000516735 96 ntBASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 SNORD60.2-201ENST00000516883 86 ntBASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 MIR2276-201ENST00000516886 89 ntBASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 MIR3162-201ENST00000581818 82 ntBASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 AC104763.2-201ENST00000604179 382 ntBASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 AP001486.3-201ENST00000615334 372 ntBASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 AL008636.1-201ENST00000625038 1018 ntBASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 AC099654.14-201ENST00000638599 341 ntBASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 AC022336.2-201ENST00000568966 2538 ntBASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 AL049641.1-201ENST00000441055 1948 ntBASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 AC007785.2-201ENST00000598627 1916 ntBASIC4.82□□□□□ -1.64
CDK11AQ9UQ88 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 Y_RNA.88-201ENST00000363029 99 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 RNA5SP139-201ENST00000364340 117 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 FGF7P8-201ENST00000402994 292 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 RNA5SP118-201ENST00000410385 109 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 RNU2-29P-201ENST00000410423 189 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 AC093106.2-201ENST00000428212 385 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 CALM2P2-201ENST00000428512 440 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 HMGB3P8-201ENST00000449709 577 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 AC006539.3-201ENST00000454258 129 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 RPS29P15-201ENST00000458329 171 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 RNU6-953P-201ENST00000459154 107 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 RPS4XP22-201ENST00000480755 780 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 AC233702.1-201ENST00000482905 502 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 RNA5SP401-201ENST00000515920 127 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 RN7SKP272-201ENST00000516988 232 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 AP006587.4-201ENST00000526053 529 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 AC005951.2-201ENST00000576282 495 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 MIR548S-201ENST00000581352 82 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 ELOCP29-201ENST00000588193 334 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 NUTF2P8-201ENST00000604593 363 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 AL020991.1-201ENST00000612314 373 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 AC024940.5-201ENST00000622889 474 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 MIR3662-201ENST00000637030 95 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 API5P2-201ENST00000397055 1498 ntBASIC4.81□□□□□ -1.64
CDK11AQ9UQ88 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDK11AQ9UQ88 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDK11AQ9UQ88 AL513331.1-201ENST00000411908 397 ntBASIC4.8□□□□□ -1.64
CDK11AQ9UQ88 AC022028.1-201ENST00000412054 408 ntBASIC4.8□□□□□ -1.64
CDK11AQ9UQ88 Z85995.1-201ENST00000415547 335 ntBASIC4.8□□□□□ -1.64
CDK11AQ9UQ88 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.8□□□□□ -1.64
CDK11AQ9UQ88 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.8□□□□□ -1.64
CDK11AQ9UQ88 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.8□□□□□ -1.64
CDK11AQ9UQ88 HMGB1P31-201ENST00000437242 427 ntBASIC4.8□□□□□ -1.64
CDK11AQ9UQ88 CBWD4P-201ENST00000445695 655 ntBASIC4.8□□□□□ -1.64
CDK11AQ9UQ88 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDK11AQ9UQ88 RNU6-358P-201ENST00000516564 75 ntBASIC4.8□□□□□ -1.64
CDK11AQ9UQ88 RNU6-677P-201ENST00000516914 101 ntBASIC4.8□□□□□ -1.64
CDK11AQ9UQ88 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.8□□□□□ -1.64
CDK11AQ9UQ88 AC024619.4-201ENST00000580924 316 ntBASIC4.8□□□□□ -1.64
CDK11AQ9UQ88 AL365204.3-201ENST00000612448 685 ntBASIC4.8□□□□□ -1.64
CDK11AQ9UQ88 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDK11AQ9UQ88 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.8□□□□□ -1.64
CDK11AQ9UQ88 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDK11AQ9UQ88 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDK11AQ9UQ88 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.8□□□□□ -1.64
CDK11AQ9UQ88 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.8□□□□□ -1.64
CDK11AQ9UQ88 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDK11AQ9UQ88 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 AC004972.1-201ENST00000623934 2209 ntBASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 RNU6-61P-201ENST00000365528 109 ntBASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 RNU6-1029P-201ENST00000384109 107 ntBASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 RNU6-1035P-201ENST00000384477 107 ntBASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 AL451054.2-201ENST00000420896 202 ntBASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 FABP5P13-201ENST00000452144 328 ntBASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 CACYBPP2-201ENST00000453625 678 ntBASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 AC074344.1-201ENST00000512823 224 ntBASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 AC091826.1-201ENST00000514065 313 ntBASIC4.79□□□□□ -1.64
CDK11AQ9UQ88 RNA5SP291-201ENST00000517222 105 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms