Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RPS26P8-201ENST00000393490 348 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 AL360182.1-201ENST00000397433 468 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 MIR548F5-201ENST00000408421 86 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 RNA5SP31-201ENST00000411144 127 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 AC074085.1-201ENST00000413598 418 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 AL096701.2-201ENST00000416920 238 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.75□□□□□ -1.81
MKS1Q9NXB0 TRIAP1P1-201ENST00000427062 225 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.75□□□□□ -1.81
MKS1Q9NXB0 SNAP23P1-201ENST00000433229 246 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 MTND1P17-201ENST00000448961 204 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.75□□□□□ -1.81
MKS1Q9NXB0 U3.44-201ENST00000458938 192 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 MTND4P17-201ENST00000470444 350 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.75□□□□□ -1.81
MKS1Q9NXB0 MTND5P5-201ENST00000503764 376 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 Y_RNA.675-201ENST00000516389 149 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 AC026371.1-201ENST00000551867 419 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 LINC00933-203ENST00000559812 219 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 AC007151.1-201ENST00000572774 483 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 AL355375.2-201ENST00000574825 175 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 IPO5P1-202ENST00000600039 287 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 AC008745.1-201ENST00000604064 271 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 MTND4LP5-201ENST00000605152 292 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 ATP5A1P2-202ENST00000616464 443 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 Z69720.2-201ENST00000624755 279 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 MIR7641-1-201ENST00000627518 61 ntBASIC3.75□□□□□ -1.81
MKS1Q9NXB0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
MKS1Q9NXB0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
MKS1Q9NXB0 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.74□□□□□ -1.81
MKS1Q9NXB0 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.74□□□□□ -1.81
MKS1Q9NXB0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
MKS1Q9NXB0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
MKS1Q9NXB0 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
MKS1Q9NXB0 SNORA57.3-201ENST00000411095 141 ntBASIC3.74□□□□□ -1.81
MKS1Q9NXB0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.74□□□□□ -1.81
MKS1Q9NXB0 RPS15AP6-201ENST00000420703 385 ntBASIC3.74□□□□□ -1.81
MKS1Q9NXB0 AL691449.1-201ENST00000426570 421 ntBASIC3.74□□□□□ -1.81
MKS1Q9NXB0 AC006989.1-201ENST00000427212 131 ntBASIC3.74□□□□□ -1.81
MKS1Q9NXB0 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.74□□□□□ -1.81
MKS1Q9NXB0 NDUFB1P1-201ENST00000435191 180 ntBASIC3.74□□□□□ -1.81
MKS1Q9NXB0 AL714022.1-201ENST00000439897 151 ntBASIC3.74□□□□□ -1.81
MKS1Q9NXB0 AC098831.1-201ENST00000440661 216 ntBASIC3.74□□□□□ -1.81
MKS1Q9NXB0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.74□□□□□ -1.81
MKS1Q9NXB0 AC107399.1-201ENST00000451226 265 ntBASIC3.74□□□□□ -1.81
MKS1Q9NXB0 MRPS31P2-201ENST00000451581 518 ntBASIC3.74□□□□□ -1.81
MKS1Q9NXB0 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.74□□□□□ -1.81
MKS1Q9NXB0 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
MKS1Q9NXB0 AC092436.3-201ENST00000511788 257 ntBASIC3.74□□□□□ -1.81
MKS1Q9NXB0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
MKS1Q9NXB0 RAB9BP1-201ENST00000519581 626 ntBASIC3.74□□□□□ -1.81
MKS1Q9NXB0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.74□□□□□ -1.81
MKS1Q9NXB0 NACAP3-201ENST00000552100 481 ntBASIC3.74□□□□□ -1.81
MKS1Q9NXB0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.74□□□□□ -1.81
MKS1Q9NXB0 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.74□□□□□ -1.81
MKS1Q9NXB0 POLR3GP2-201ENST00000588366 668 ntBASIC3.74□□□□□ -1.81
MKS1Q9NXB0 AL355365.1-201ENST00000616480 294 ntBASIC3.74□□□□□ -1.81
MKS1Q9NXB0 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.74□□□□□ -1.81
MKS1Q9NXB0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
MKS1Q9NXB0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
MKS1Q9NXB0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
MKS1Q9NXB0 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.74□□□□□ -1.81
MKS1Q9NXB0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
MKS1Q9NXB0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
MKS1Q9NXB0 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.73□□□□□ -1.81
MKS1Q9NXB0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
MKS1Q9NXB0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
MKS1Q9NXB0 Y_RNA.11-201ENST00000362375 109 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 RNU6-37P-201ENST00000362692 107 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 RNU1-32P-201ENST00000363937 159 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 RNU6-11P-201ENST00000364234 107 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 RNU6-7-201ENST00000364784 107 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 RNU6-8-201ENST00000365467 107 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 RNU6-25P-201ENST00000383873 107 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 RNU6-1-201ENST00000383898 107 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 RNU6-48P-201ENST00000384161 107 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 RNU6-36P-201ENST00000384172 107 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 RNU6-4P-201ENST00000384205 107 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 RNU6-5P-201ENST00000384238 107 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 RNU6-3P-201ENST00000384314 107 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 RNU6-16P-201ENST00000384385 107 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 RNU6-15P-201ENST00000384534 107 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 RNU6-2-201ENST00000384627 107 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 RNU6-29P-201ENST00000384637 107 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 RNU6-9-201ENST00000384776 107 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 RNU6-33P-201ENST00000384793 107 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.73□□□□□ -1.81
MKS1Q9NXB0 RN7SKP158-201ENST00000410453 326 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 RNU6-1077P-201ENST00000410506 102 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.73□□□□□ -1.81
MKS1Q9NXB0 AL159987.2-201ENST00000432754 307 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.73□□□□□ -1.81
MKS1Q9NXB0 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.73□□□□□ -1.81
MKS1Q9NXB0 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.73□□□□□ -1.81
MKS1Q9NXB0 RPL39P5-202ENST00000512505 151 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 SNORA31.1-201ENST00000515993 133 ntBASIC3.73□□□□□ -1.81
MKS1Q9NXB0 SNORA31.5-201ENST00000516190 133 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms