Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CUEDC1Q9NWM3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.97□□□□□ -1.61
CUEDC1Q9NWM3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
CUEDC1Q9NWM3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
CUEDC1Q9NWM3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CUEDC1Q9NWM3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.96□□□□□ -1.61
CUEDC1Q9NWM3 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CUEDC1Q9NWM3 RNU6-879P-201ENST00000364328 108 ntBASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 RNU4-56P-201ENST00000364700 142 ntBASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 RNU6-80P-201ENST00000384195 107 ntBASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 SNORD12B-201ENST00000410433 91 ntBASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 RN7SL385P-201ENST00000468873 276 ntBASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 PDCD5P2-201ENST00000507570 312 ntBASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 SNORA40.9-201ENST00000515895 93 ntBASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 RNU6-971P-201ENST00000516920 106 ntBASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 AP002001.1-203ENST00000534002 267 ntBASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 NDUFB4P11-201ENST00000560510 395 ntBASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 MIR3690-201ENST00000580266 75 ntBASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 AC234771.5-201ENST00000600161 514 ntBASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 AC008121.1-201ENST00000603244 268 ntBASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 AL670379.2-201ENST00000604983 252 ntBASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 AC005828.6-201ENST00000606610 232 ntBASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 SCARNA4-201ENST00000629045 128 ntBASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CUEDC1Q9NWM3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 SNORD115-32-201ENST00000364079 82 ntBASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 RNU6-898P-201ENST00000365627 104 ntBASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 MTND4LP9-201ENST00000427694 174 ntBASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 AC016925.1-201ENST00000458303 298 ntBASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 RPL26P26-201ENST00000480251 434 ntBASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 CYCTP-201ENST00000504253 315 ntBASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 AC093840.1-201ENST00000511599 336 ntBASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 AC011447.4-201ENST00000587562 111 ntBASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 AC002545.1-201ENST00000592511 181 ntBASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 AC023043.4-201ENST00000612081 449 ntBASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 AC048347.1-201ENST00000624621 427 ntBASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.95□□□□□ -1.62
CUEDC1Q9NWM3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 RNA5SP197-201ENST00000363357 119 ntBASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 Y_RNA.238-201ENST00000364441 102 ntBASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 RNU6-1056P-201ENST00000383996 107 ntBASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 MIR514A1-201ENST00000385133 98 ntBASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 RNU6-239P-201ENST00000390990 99 ntBASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 RNU6-1025P-201ENST00000410629 104 ntBASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 RPL30P13-201ENST00000418873 348 ntBASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 RAB28P5-201ENST00000427490 651 ntBASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 SEPT7P4-201ENST00000437076 306 ntBASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 AC009296.1-201ENST00000443146 155 ntBASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 RPS29P33-201ENST00000456717 146 ntBASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 AC020890.1-201ENST00000491837 504 ntBASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 RNU4-57P-201ENST00000515980 135 ntBASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 RNU6-1114P-201ENST00000516022 107 ntBASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 RNA5SP272-201ENST00000516095 111 ntBASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 RN7SKP289-201ENST00000517244 295 ntBASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 CYCSP26-201ENST00000534107 320 ntBASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 MIR4679-1-201ENST00000637619 75 ntBASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 AP001642.1-201ENST00000624727 2117 ntBASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 AC116096.1-201ENST00000566804 2314 ntBASIC4.94□□□□□ -1.62
CUEDC1Q9NWM3 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms