Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 RNU7-167P-201ENST00000459160 62 ntBASIC4.98□□□□□ -1.61
ATG3Q9NT62 HMGN1P11-201ENST00000508668 303 ntBASIC4.98□□□□□ -1.61
ATG3Q9NT62 SNORA25.11-201ENST00000515935 105 ntBASIC4.98□□□□□ -1.61
ATG3Q9NT62 RNU6-1092P-201ENST00000516955 87 ntBASIC4.98□□□□□ -1.61
ATG3Q9NT62 RNU6-570P-201ENST00000517051 105 ntBASIC4.98□□□□□ -1.61
ATG3Q9NT62 SNORA70.24-201ENST00000517233 118 ntBASIC4.98□□□□□ -1.61
ATG3Q9NT62 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.98□□□□□ -1.61
ATG3Q9NT62 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
ATG3Q9NT62 AC106782.4-201ENST00000568264 210 ntBASIC4.98□□□□□ -1.61
ATG3Q9NT62 RPL23AP84-201ENST00000571193 464 ntBASIC4.98□□□□□ -1.61
ATG3Q9NT62 AC130289.1-201ENST00000577321 73 ntBASIC4.98□□□□□ -1.61
ATG3Q9NT62 AL713866.2-201ENST00000603579 219 ntBASIC4.98□□□□□ -1.61
ATG3Q9NT62 AC009779.6-201ENST00000603972 165 ntBASIC4.98□□□□□ -1.61
ATG3Q9NT62 AC104763.2-201ENST00000604179 382 ntBASIC4.98□□□□□ -1.61
ATG3Q9NT62 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ATG3Q9NT62 U2.17-201ENST00000611454 95 ntBASIC4.98□□□□□ -1.61
ATG3Q9NT62 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.98□□□□□ -1.61
ATG3Q9NT62 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
ATG3Q9NT62 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ATG3Q9NT62 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ATG3Q9NT62 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ATG3Q9NT62 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ATG3Q9NT62 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
ATG3Q9NT62 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.97□□□□□ -1.61
ATG3Q9NT62 RNU6-338P-201ENST00000383888 105 ntBASIC4.97□□□□□ -1.61
ATG3Q9NT62 MIR199A2-201ENST00000385289 110 ntBASIC4.97□□□□□ -1.61
ATG3Q9NT62 SNORA3C-201ENST00000408792 125 ntBASIC4.97□□□□□ -1.61
ATG3Q9NT62 AC005094.1-201ENST00000440420 368 ntBASIC4.97□□□□□ -1.61
ATG3Q9NT62 RNU2-69P-201ENST00000516061 100 ntBASIC4.97□□□□□ -1.61
ATG3Q9NT62 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.97□□□□□ -1.61
ATG3Q9NT62 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.97□□□□□ -1.61
ATG3Q9NT62 AC022695.1-201ENST00000522089 237 ntBASIC4.97□□□□□ -1.61
ATG3Q9NT62 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.97□□□□□ -1.61
ATG3Q9NT62 AC026371.1-201ENST00000551867 419 ntBASIC4.97□□□□□ -1.61
ATG3Q9NT62 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.97□□□□□ -1.61
ATG3Q9NT62 MIR3133-201ENST00000583157 78 ntBASIC4.97□□□□□ -1.61
ATG3Q9NT62 AC010900.2-201ENST00000604508 210 ntBASIC4.97□□□□□ -1.61
ATG3Q9NT62 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.97□□□□□ -1.61
ATG3Q9NT62 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.97□□□□□ -1.61
ATG3Q9NT62 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.97□□□□□ -1.61
ATG3Q9NT62 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
ATG3Q9NT62 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ATG3Q9NT62 AC103710.2-202ENST00000641454 2853 ntBASIC4.97□□□□□ -1.61
ATG3Q9NT62 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.97□□□□□ -1.61
ATG3Q9NT62 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ATG3Q9NT62 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
ATG3Q9NT62 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.97□□□□□ -1.61
ATG3Q9NT62 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.61
ATG3Q9NT62 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
ATG3Q9NT62 AL136964.1-201ENST00000622038 2990 ntBASIC4.96□□□□□ -1.61
ATG3Q9NT62 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ATG3Q9NT62 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.96□□□□□ -1.62
ATG3Q9NT62 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ATG3Q9NT62 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ATG3Q9NT62 Y_RNA.19-201ENST00000362462 99 ntBASIC4.96□□□□□ -1.62
ATG3Q9NT62 SNORD74.4-201ENST00000364129 80 ntBASIC4.96□□□□□ -1.62
ATG3Q9NT62 RNA5SP72-201ENST00000364442 117 ntBASIC4.96□□□□□ -1.62
ATG3Q9NT62 U3.15-201ENST00000365398 212 ntBASIC4.96□□□□□ -1.62
ATG3Q9NT62 Y_RNA.478-201ENST00000384358 107 ntBASIC4.96□□□□□ -1.62
ATG3Q9NT62 MIR1250-201ENST00000408098 113 ntBASIC4.96□□□□□ -1.62
ATG3Q9NT62 RPL23AP69-201ENST00000431134 458 ntBASIC4.96□□□□□ -1.62
ATG3Q9NT62 AC104332.1-201ENST00000440471 797 ntBASIC4.96□□□□□ -1.62
ATG3Q9NT62 AL121871.1-201ENST00000443413 436 ntBASIC4.96□□□□□ -1.62
ATG3Q9NT62 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.96□□□□□ -1.62
ATG3Q9NT62 NDUFS5P3-201ENST00000450668 321 ntBASIC4.96□□□□□ -1.62
ATG3Q9NT62 AP001086.1-201ENST00000494882 321 ntBASIC4.96□□□□□ -1.62
ATG3Q9NT62 AC026801.1-201ENST00000497178 464 ntBASIC4.96□□□□□ -1.62
ATG3Q9NT62 AC025445.1-201ENST00000502728 300 ntBASIC4.96□□□□□ -1.62
ATG3Q9NT62 AC026784.1-201ENST00000507986 352 ntBASIC4.96□□□□□ -1.62
ATG3Q9NT62 RNU4-60P-201ENST00000517239 135 ntBASIC4.96□□□□□ -1.62
ATG3Q9NT62 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.96□□□□□ -1.62
ATG3Q9NT62 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.96□□□□□ -1.62
ATG3Q9NT62 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ATG3Q9NT62 AC090517.1-201ENST00000569307 266 ntBASIC4.96□□□□□ -1.62
ATG3Q9NT62 AC005899.2-201ENST00000584353 90 ntBASIC4.96□□□□□ -1.62
ATG3Q9NT62 RNA5SP108-201ENST00000605921 117 ntBASIC4.96□□□□□ -1.62
ATG3Q9NT62 AC004792.1-201ENST00000614523 137 ntBASIC4.96□□□□□ -1.62
ATG3Q9NT62 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.96□□□□□ -1.62
ATG3Q9NT62 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ATG3Q9NT62 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ATG3Q9NT62 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.95□□□□□ -1.62
ATG3Q9NT62 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ATG3Q9NT62 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
ATG3Q9NT62 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ATG3Q9NT62 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ATG3Q9NT62 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.95□□□□□ -1.62
ATG3Q9NT62 Y_RNA.20-201ENST00000362479 113 ntBASIC4.95□□□□□ -1.62
ATG3Q9NT62 RNU6-212P-201ENST00000362642 104 ntBASIC4.95□□□□□ -1.62
ATG3Q9NT62 SNORD27-201ENST00000363981 72 ntBASIC4.95□□□□□ -1.62
ATG3Q9NT62 RNU6-886P-201ENST00000384319 105 ntBASIC4.95□□□□□ -1.62
ATG3Q9NT62 RNU6-393P-201ENST00000384475 107 ntBASIC4.95□□□□□ -1.62
ATG3Q9NT62 MIR513A2-201ENST00000385249 127 ntBASIC4.95□□□□□ -1.62
ATG3Q9NT62 PCNPP3-201ENST00000393579 471 ntBASIC4.95□□□□□ -1.62
ATG3Q9NT62 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
ATG3Q9NT62 MIR1251-201ENST00000408552 70 ntBASIC4.95□□□□□ -1.62
ATG3Q9NT62 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.95□□□□□ -1.62
ATG3Q9NT62 AC097713.2-201ENST00000430199 356 ntBASIC4.95□□□□□ -1.62
ATG3Q9NT62 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.95□□□□□ -1.62
ATG3Q9NT62 SNORD108-201ENST00000459332 71 ntBASIC4.95□□□□□ -1.62
ATG3Q9NT62 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms