Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RNU6-944P-201ENST00000364023 107 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 U3.12-201ENST00000364498 214 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 RNU6-546P-201ENST00000383991 107 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 SNORA18.3-201ENST00000384122 132 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 MIR518C-201ENST00000384822 101 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 MIR550A3-201ENST00000390735 95 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 RNU6-817P-201ENST00000391083 104 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 RNU2-20P-201ENST00000410425 191 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 SRIP3-201ENST00000413200 219 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 TOMM22P2-201ENST00000430735 237 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 HMGB1P27-201ENST00000431429 603 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 MTCO3P5-201ENST00000433620 714 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 RPL23AP76-201ENST00000441860 458 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 HIGD1AP2-201ENST00000446367 280 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AC079448.1-201ENST00000449377 373 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AL590365.1-201ENST00000450788 243 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AC108938.1-201ENST00000451204 136 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 MTAPP1-201ENST00000489154 819 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 HIGD1AP13-201ENST00000509878 289 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AC117532.1-201ENST00000514638 323 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 Y_RNA.675-201ENST00000516389 149 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AC022616.8-201ENST00000533569 253 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AL136520.1-202ENST00000555494 763 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AC136618.2-201ENST00000575091 400 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AP001981.2-201ENST00000603241 418 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AC006270.3-201ENST00000605967 1036 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AC024060.1-201ENST00000607052 494 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AC093788.1-201ENST00000609356 927 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AL133445.2-201ENST00000611191 527 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AC099842.1-201ENST00000619919 596 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 MIR7843-201ENST00000622274 79 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 MIR4302-201ENST00000638058 60 ntBASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 Y_RNA.40-201ENST00000362645 93 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 RNU6-942P-201ENST00000363002 107 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 RNU6-529P-201ENST00000363383 104 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 SNORA75B-201ENST00000384053 137 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 RNU6-843P-201ENST00000384454 104 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 RNU1-78P-201ENST00000391248 165 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 SPTLC1P2-201ENST00000407089 121 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 MIR1284-201ENST00000408337 120 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 SNORA11.4-201ENST00000408823 129 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 RNU2-41P-201ENST00000410991 178 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 RPS12P24-201ENST00000412619 387 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 AL139156.1-201ENST00000412785 841 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 RPL23AP39-201ENST00000415533 405 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 MTND4P3-201ENST00000417829 541 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 AC083875.1-201ENST00000419509 405 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 AL158156.1-201ENST00000422509 473 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 USP9YP18-201ENST00000425912 695 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 USP9YP11-201ENST00000427537 717 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 AL078601.1-201ENST00000444542 271 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 AC245102.2-201ENST00000448956 180 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 SSXP1-201ENST00000453640 473 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 OR2A41P-201ENST00000473586 105 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 AL121594.1-201ENST00000475906 575 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 AC010409.1-201ENST00000487382 476 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 AC109927.2-201ENST00000506416 303 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 AC021146.8-201ENST00000507455 733 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 AC008549.1-201ENST00000512900 643 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 MIR4422-201ENST00000581938 83 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 VN1R83P-201ENST00000595685 445 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms