Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 CST9LP2-201ENST00000437612 320 ntBASIC2.98□□□□□ -1.93
HINT3Q9NQE9 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.98□□□□□ -1.93
HINT3Q9NQE9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.98□□□□□ -1.93
HINT3Q9NQE9 AC115115.1-201ENST00000449927 248 ntBASIC2.98□□□□□ -1.93
HINT3Q9NQE9 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.98□□□□□ -1.93
HINT3Q9NQE9 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.98□□□□□ -1.93
HINT3Q9NQE9 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.98□□□□□ -1.93
HINT3Q9NQE9 AC025518.1-201ENST00000479856 347 ntBASIC2.98□□□□□ -1.93
HINT3Q9NQE9 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.98□□□□□ -1.93
HINT3Q9NQE9 RNU6-358P-201ENST00000516564 75 ntBASIC2.98□□□□□ -1.93
HINT3Q9NQE9 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.98□□□□□ -1.93
HINT3Q9NQE9 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.98□□□□□ -1.93
HINT3Q9NQE9 H3F3AP1-201ENST00000559984 334 ntBASIC2.98□□□□□ -1.93
HINT3Q9NQE9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.98□□□□□ -1.93
HINT3Q9NQE9 AL035413.2-201ENST00000604801 525 ntBASIC2.98□□□□□ -1.93
HINT3Q9NQE9 RNU6-89P-201ENST00000606519 100 ntBASIC2.98□□□□□ -1.93
HINT3Q9NQE9 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.98□□□□□ -1.93
HINT3Q9NQE9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.98□□□□□ -1.93
HINT3Q9NQE9 AC004520.1-201ENST00000608362 1413 ntBASIC2.98□□□□□ -1.93
HINT3Q9NQE9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
HINT3Q9NQE9 AL356274.2-201ENST00000624379 3752 ntBASIC2.98□□□□□ -1.93
HINT3Q9NQE9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.97□□□□□ -1.93
HINT3Q9NQE9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HINT3Q9NQE9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HINT3Q9NQE9 RNU6-778P-201ENST00000363269 103 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 RNA5SP72-201ENST00000364442 117 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 RNU6-434P-201ENST00000384376 107 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 RNU6-1179P-201ENST00000384667 107 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 MIR183-201ENST00000384958 110 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 SNORD17-201ENST00000390930 237 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.97□□□□□ -1.93
HINT3Q9NQE9 RNU6-373P-201ENST00000411247 98 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 RPL30P16-201ENST00000419341 429 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 HMGN2P30-201ENST00000423237 256 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 SKA2P1-201ENST00000425592 390 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 SRIP2-201ENST00000428470 166 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 ERLEC1P1-201ENST00000433806 578 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 AL121601.2-201ENST00000438019 707 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 BRK1P2-201ENST00000442875 223 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 WASF1P1-201ENST00000447560 1131 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 RPL7P49-201ENST00000471402 708 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 HMGN2P13-201ENST00000476476 274 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 MTCYBP18-201ENST00000501056 747 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 PRDX4P1-201ENST00000507189 574 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.97□□□□□ -1.93
HINT3Q9NQE9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.97□□□□□ -1.93
HINT3Q9NQE9 PHBP14-201ENST00000512887 367 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 RNA5SP217-201ENST00000515959 91 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 RNU2-69P-201ENST00000516061 100 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 RNU1-103P-201ENST00000516502 125 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 RNU6-1038P-201ENST00000516516 104 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 RNU6-703P-201ENST00000516946 107 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 IGHV3-76-201ENST00000522465 295 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HINT3Q9NQE9 AC078814.3-201ENST00000553036 491 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.97□□□□□ -1.93
HINT3Q9NQE9 AL118558.2-201ENST00000556294 238 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.97□□□□□ -1.93
HINT3Q9NQE9 AC073539.2-201ENST00000597113 165 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 AC012119.1-201ENST00000603184 222 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 uc_338.1-201ENST00000612113 180 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 AL355365.1-201ENST00000616480 294 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 U6.105-201ENST00000637379 88 ntBASIC2.97□□□□□ -1.93
HINT3Q9NQE9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.97□□□□□ -1.93
HINT3Q9NQE9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HINT3Q9NQE9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.93
HINT3Q9NQE9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HINT3Q9NQE9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
HINT3Q9NQE9 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HINT3Q9NQE9 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HINT3Q9NQE9 SNORA63.1-201ENST00000362493 131 ntBASIC2.96□□□□□ -1.94
HINT3Q9NQE9 RNU4-35P-201ENST00000362588 141 ntBASIC2.96□□□□□ -1.94
HINT3Q9NQE9 SNORD3E-201ENST00000362899 217 ntBASIC2.96□□□□□ -1.94
HINT3Q9NQE9 Y_RNA.399-201ENST00000383955 105 ntBASIC2.96□□□□□ -1.94
HINT3Q9NQE9 SNORA40C-201ENST00000391285 128 ntBASIC2.96□□□□□ -1.94
HINT3Q9NQE9 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HINT3Q9NQE9 RNA5SP229-201ENST00000410809 99 ntBASIC2.96□□□□□ -1.94
HINT3Q9NQE9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.96□□□□□ -1.94
HINT3Q9NQE9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.96□□□□□ -1.94
HINT3Q9NQE9 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.96□□□□□ -1.94
HINT3Q9NQE9 HSPE1P1-201ENST00000421494 318 ntBASIC2.96□□□□□ -1.94
HINT3Q9NQE9 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.96□□□□□ -1.94
HINT3Q9NQE9 AL159987.2-201ENST00000432754 307 ntBASIC2.96□□□□□ -1.94
HINT3Q9NQE9 RPL21P93-201ENST00000480465 489 ntBASIC2.96□□□□□ -1.94
HINT3Q9NQE9 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.96□□□□□ -1.94
HINT3Q9NQE9 RPL21P13-201ENST00000488305 481 ntBASIC2.96□□□□□ -1.94
HINT3Q9NQE9 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
HINT3Q9NQE9 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.96□□□□□ -1.94
HINT3Q9NQE9 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.96□□□□□ -1.94
HINT3Q9NQE9 FCF1P8-201ENST00000510322 597 ntBASIC2.96□□□□□ -1.94
HINT3Q9NQE9 AC008716.1-201ENST00000511084 513 ntBASIC2.96□□□□□ -1.94
HINT3Q9NQE9 RNU6-572P-201ENST00000516724 80 ntBASIC2.96□□□□□ -1.94
HINT3Q9NQE9 SNORA31.19-201ENST00000517079 126 ntBASIC2.96□□□□□ -1.94
HINT3Q9NQE9 IGKV2-26-201ENST00000518305 343 ntBASIC2.96□□□□□ -1.94
HINT3Q9NQE9 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.96□□□□□ -1.94
HINT3Q9NQE9 AC245166.1-201ENST00000521012 253 ntBASIC2.96□□□□□ -1.94
HINT3Q9NQE9 CENPUP1-201ENST00000526649 1202 ntBASIC2.96□□□□□ -1.94
HINT3Q9NQE9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.96□□□□□ -1.94
HINT3Q9NQE9 TRAV37-201ENST00000553906 342 ntBASIC2.96□□□□□ -1.94
HINT3Q9NQE9 AL391261.3-201ENST00000557194 520 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms