Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.67□□□□□ -2.14
VCX3AQ9NNX9 HSPE1P21-201ENST00000438283 308 ntBASIC1.67□□□□□ -2.14
VCX3AQ9NNX9 NEFMP1-201ENST00000443423 1006 ntBASIC1.67□□□□□ -2.14
VCX3AQ9NNX9 AC104978.1-201ENST00000449387 391 ntBASIC1.67□□□□□ -2.14
VCX3AQ9NNX9 RPL39P36-201ENST00000490784 156 ntBASIC1.67□□□□□ -2.14
VCX3AQ9NNX9 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.67□□□□□ -2.14
VCX3AQ9NNX9 RNU5B-3P-201ENST00000516601 115 ntBASIC1.67□□□□□ -2.14
VCX3AQ9NNX9 AC091163.3-201ENST00000518269 1144 ntBASIC1.67□□□□□ -2.14
VCX3AQ9NNX9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.67□□□□□ -2.14
VCX3AQ9NNX9 AC034105.4-201ENST00000568304 277 ntBASIC1.67□□□□□ -2.14
VCX3AQ9NNX9 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.67□□□□□ -2.14
VCX3AQ9NNX9 AC068790.3-201ENST00000602988 553 ntBASIC1.67□□□□□ -2.14
VCX3AQ9NNX9 BNIP3P9-201ENST00000603714 553 ntBASIC1.67□□□□□ -2.14
VCX3AQ9NNX9 AC007363.1-201ENST00000604736 620 ntBASIC1.67□□□□□ -2.14
VCX3AQ9NNX9 AC025034.2-201ENST00000623264 286 ntBASIC1.67□□□□□ -2.14
VCX3AQ9NNX9 AC091953.2-201ENST00000623979 160 ntBASIC1.67□□□□□ -2.14
VCX3AQ9NNX9 AC099654.8-201ENST00000637757 681 ntBASIC1.67□□□□□ -2.14
VCX3AQ9NNX9 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.67□□□□□ -2.14
VCX3AQ9NNX9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 AC062016.1-201ENST00000355719 319 ntBASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 RNU6-462P-201ENST00000362659 105 ntBASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 5S_rRNA.1-201ENST00000364415 116 ntBASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 SNORD116.1-201ENST00000365628 92 ntBASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 MTAPP1-201ENST00000489154 819 ntBASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 AC104090.1-201ENST00000506341 1171 ntBASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 SNORA31.19-201ENST00000517079 126 ntBASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 CBX3P4-201ENST00000538909 354 ntBASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 NDUFA5P6-201ENST00000542110 379 ntBASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 HSBP1P1-201ENST00000555205 166 ntBASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 MIR4319-201ENST00000577285 85 ntBASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 MTND3P19-201ENST00000603825 345 ntBASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 ELOCP5-201ENST00000604924 333 ntBASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 AL160281.1-201ENST00000605307 311 ntBASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 AC126118.1-201ENST00000607744 628 ntBASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
VCX3AQ9NNX9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 RNU5A-8P-201ENST00000364102 114 ntBASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 SNORA8-201ENST00000384574 139 ntBASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 MIR134-201ENST00000385258 73 ntBASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 RNU6-278P-201ENST00000390945 109 ntBASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 FTH1P15-201ENST00000406984 280 ntBASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 HIGD1AP2-201ENST00000446367 280 ntBASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 BTF3P15-201ENST00000455606 336 ntBASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 RPS3AP22-201ENST00000488297 769 ntBASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 MTND4P2-201ENST00000507767 1203 ntBASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 AC117522.2-201ENST00000510049 657 ntBASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 SNORA67.7-201ENST00000516664 135 ntBASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 RNU6-143P-201ENST00000516942 93 ntBASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 AP005435.4-201ENST00000529514 284 ntBASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 AP000907.2-201ENST00000530827 353 ntBASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 AC087045.1-201ENST00000605856 382 ntBASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 AC097468.3-201ENST00000607956 456 ntBASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 AL355472.4-201ENST00000610233 626 ntBASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 AC008121.3-201ENST00000618726 433 ntBASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 MIR6810-201ENST00000622701 70 ntBASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 AL356266.1-201ENST00000623311 483 ntBASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.65□□□□□ -2.15
VCX3AQ9NNX9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.64□□□□□ -2.15
VCX3AQ9NNX9 TEX21P-201ENST00000447107 1476 ntBASIC1.64□□□□□ -2.15
VCX3AQ9NNX9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
VCX3AQ9NNX9 AL356432.1-201ENST00000405809 419 ntBASIC1.64□□□□□ -2.15
VCX3AQ9NNX9 FCF1P10-201ENST00000407590 479 ntBASIC1.64□□□□□ -2.15
VCX3AQ9NNX9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.64□□□□□ -2.15
VCX3AQ9NNX9 RPS12P24-201ENST00000412619 387 ntBASIC1.64□□□□□ -2.15
VCX3AQ9NNX9 VPS26BP1-201ENST00000417155 755 ntBASIC1.64□□□□□ -2.15
VCX3AQ9NNX9 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.64□□□□□ -2.15
VCX3AQ9NNX9 AC008267.5-201ENST00000424928 265 ntBASIC1.64□□□□□ -2.15
VCX3AQ9NNX9 TXNL1P1-201ENST00000429528 554 ntBASIC1.64□□□□□ -2.15
VCX3AQ9NNX9 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.64□□□□□ -2.15
VCX3AQ9NNX9 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.64□□□□□ -2.15
VCX3AQ9NNX9 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.64□□□□□ -2.15
VCX3AQ9NNX9 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC1.64□□□□□ -2.15
VCX3AQ9NNX9 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.64□□□□□ -2.15
VCX3AQ9NNX9 AL137159.1-201ENST00000452808 512 ntBASIC1.64□□□□□ -2.15
VCX3AQ9NNX9 KATNBL1P6-201ENST00000453433 915 ntBASIC1.64□□□□□ -2.15
VCX3AQ9NNX9 RNU1-98P-201ENST00000458992 160 ntBASIC1.64□□□□□ -2.15
VCX3AQ9NNX9 FTH1P2-201ENST00000466086 412 ntBASIC1.64□□□□□ -2.15
VCX3AQ9NNX9 MTCYBP43-201ENST00000513621 740 ntBASIC1.64□□□□□ -2.15
VCX3AQ9NNX9 AC010376.1-201ENST00000522101 334 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms