Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AC087190.1-201ENST00000484462 480 ntBASIC2.79□□□□□ -1.96
CHMP1AQ9HD42 AC093591.1-201ENST00000491435 481 ntBASIC2.79□□□□□ -1.96
CHMP1AQ9HD42 RPL21P129-201ENST00000491732 478 ntBASIC2.79□□□□□ -1.96
CHMP1AQ9HD42 RPL21P16-201ENST00000495531 483 ntBASIC2.79□□□□□ -1.96
CHMP1AQ9HD42 AC104136.1-201ENST00000512969 394 ntBASIC2.79□□□□□ -1.96
CHMP1AQ9HD42 RNU6-581P-201ENST00000516214 105 ntBASIC2.79□□□□□ -1.96
CHMP1AQ9HD42 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.79□□□□□ -1.96
CHMP1AQ9HD42 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.79□□□□□ -1.96
CHMP1AQ9HD42 HSPE1P20-201ENST00000538133 289 ntBASIC2.79□□□□□ -1.96
CHMP1AQ9HD42 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.79□□□□□ -1.96
CHMP1AQ9HD42 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.79□□□□□ -1.96
CHMP1AQ9HD42 MIR5692A1-201ENST00000580523 69 ntBASIC2.79□□□□□ -1.96
CHMP1AQ9HD42 AL162713.1-201ENST00000604480 262 ntBASIC2.79□□□□□ -1.96
CHMP1AQ9HD42 AC004492.1-201ENST00000607036 742 ntBASIC2.79□□□□□ -1.96
CHMP1AQ9HD42 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.79□□□□□ -1.96
CHMP1AQ9HD42 AC068724.3-201ENST00000625906 87 ntBASIC2.79□□□□□ -1.96
CHMP1AQ9HD42 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CHMP1AQ9HD42 AC093831.2-201ENST00000624393 3427 ntBASIC2.79□□□□□ -1.96
CHMP1AQ9HD42 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CHMP1AQ9HD42 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 AC010889.1-201ENST00000566193 2666 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 CDC27P3-201ENST00000635418 1910 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 Y_RNA.505-201ENST00000384489 102 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 SNORA16.2-201ENST00000390991 127 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 SNORD70.1-201ENST00000391007 85 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 AL590002.1-201ENST00000406554 418 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 RNU2-3P-201ENST00000410144 191 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 CYCSP33-201ENST00000414485 327 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 AL096701.2-201ENST00000416920 238 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 AC016831.2-201ENST00000417179 352 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 CYCSP4-201ENST00000429682 331 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 AL627311.1-201ENST00000431514 115 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 RPS15AP27-201ENST00000449183 343 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 UQCRHP3-201ENST00000451503 251 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 AC233279.1-201ENST00000455300 423 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 MRPS36P2-201ENST00000512569 299 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 AL137161.1-201ENST00000532231 390 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 AL512310.1-201ENST00000548639 172 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 AL121821.2-201ENST00000556081 394 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 AC092325.1-201ENST00000566449 554 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 MIR4424-201ENST00000585257 86 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 AC012119.1-201ENST00000603184 222 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 AL355877.2-201ENST00000603670 358 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 AC080078.2-201ENST00000603766 501 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 MTND5P19-201ENST00000424872 1794 ntBASIC2.78□□□□□ -1.96
CHMP1AQ9HD42 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 RNU4-35P-201ENST00000362588 141 ntBASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 RNU6-1303P-201ENST00000364841 107 ntBASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 MIR218-2-201ENST00000385006 110 ntBASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 AL122016.1-201ENST00000403365 367 ntBASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 BTF3P7-201ENST00000407097 488 ntBASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 RNU6ATAC-201ENST00000408749 126 ntBASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 RNU6-648P-201ENST00000410190 107 ntBASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 RNU6-607P-201ENST00000411283 108 ntBASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 AC245054.2-201ENST00000415639 319 ntBASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 AL445584.1-201ENST00000431451 330 ntBASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 AC092001.1-201ENST00000453012 261 ntBASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 RPL31P41-201ENST00000477967 372 ntBASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 AC011005.2-201ENST00000487324 359 ntBASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 CCDC34P1-201ENST00000507441 517 ntBASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 RNA5SP401-201ENST00000515920 127 ntBASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 RNU2-69P-201ENST00000516061 100 ntBASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 BNIP3P6-201ENST00000549284 499 ntBASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 AC234778.2-201ENST00000566241 354 ntBASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 LRRC37A5P-203ENST00000580181 585 ntBASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 AC011471.1-201ENST00000585766 187 ntBASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 AC005498.1-201ENST00000592125 465 ntBASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 RMST_4.1-201ENST00000616886 107 ntBASIC2.77□□□□□ -1.97
CHMP1AQ9HD42 AC010378.1-201ENST00000619270 362 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms