Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC015524.1-201ENST00000491585 472 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 RNU7-200P-201ENST00000516105 62 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 SNORD116-28-201ENST00000516123 91 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 RNA5SP249-201ENST00000516127 99 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 RN7SKP272-201ENST00000516988 232 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AP000620.1-201ENST00000527147 504 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC087441.2-201ENST00000529141 262 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 HIGD1AP1-201ENST00000550979 275 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 MIR5695-201ENST00000579717 85 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AL451007.1-201ENST00000595491 289 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC005176.2-201ENST00000596933 147 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AL713866.2-201ENST00000603579 219 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 SDR42E1P1-201ENST00000611327 477 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC010999.1-201ENST00000611856 324 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 MIR8082-201ENST00000612488 81 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC025574.2-201ENST00000615621 514 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 MIR8069-1-201ENST00000616627 86 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC015914.2-201ENST00000618167 288 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 MIR6849-201ENST00000618543 69 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 MIR8069-2-201ENST00000621412 86 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 DLST-216ENST00000626051 252 ntTSL 5 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 IGHVIII-44-202ENST00000636235 289 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 SUPT16HP1-201ENST00000537175 3133 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AL445487.1-201ENST00000415694 1580 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 LINC01613-201ENST00000561476 2780 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 AC023421.1-201ENST00000590535 1785 ntBASIC1.42□□□□□ -2.18
LCE3DQ9BYE3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 AC010680.1-201ENST00000590024 3590 ntBASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 AL159987.1-201ENST00000347911 293 ntBASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 Y_RNA.8-201ENST00000362353 102 ntBASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 RNU6-600P-201ENST00000362524 99 ntBASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 RNU1-62P-201ENST00000362599 164 ntBASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 RNU6-873P-201ENST00000363833 107 ntBASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 RNU6-884P-201ENST00000363889 107 ntBASIC1.41□□□□□ -2.18
LCE3DQ9BYE3 RNU6-961P-201ENST00000363893 105 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms