Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 YPEL5P2-201ENST00000605553 359 ntBASIC2.57□□□□□ -2
CCDC28BQ9BUN5 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.57□□□□□ -2
CCDC28BQ9BUN5 AP001486.3-201ENST00000615334 372 ntBASIC2.57□□□□□ -2
CCDC28BQ9BUN5 AL589994.2-201ENST00000621124 579 ntBASIC2.57□□□□□ -2
CCDC28BQ9BUN5 AL359880.1-201ENST00000621879 266 ntBASIC2.57□□□□□ -2
CCDC28BQ9BUN5 MIR6863-201ENST00000636112 90 ntBASIC2.57□□□□□ -2
CCDC28BQ9BUN5 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
CCDC28BQ9BUN5 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CCDC28BQ9BUN5 ZNF519P1-201ENST00000449011 1626 ntBASIC2.57□□□□□ -2
CCDC28BQ9BUN5 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC28BQ9BUN5 AC007785.2-201ENST00000598627 1916 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 AC135776.4-201ENST00000624300 1904 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.56□□□□□ -2
CCDC28BQ9BUN5 AC022336.2-201ENST00000568966 2538 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 RNU6-188P-201ENST00000364207 107 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 U8.8-201ENST00000365399 135 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 Y_RNA.367-201ENST00000365544 101 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 Y_RNA.481-201ENST00000384373 102 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 RNU6-606P-201ENST00000384721 111 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 MIR627-201ENST00000384979 97 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 MIR454-201ENST00000390180 115 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 MTCO3P40-201ENST00000392516 676 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 RPS4XP8-201ENST00000402039 771 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 FAT1P1-201ENST00000406588 507 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 RNU2-33P-201ENST00000410344 192 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 RNU6-387P-201ENST00000411331 105 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 RPLP0P7-201ENST00000416050 667 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 RPS3AP44-201ENST00000425466 790 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 ISCA1P1-201ENST00000426679 387 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.56□□□□□ -2
CCDC28BQ9BUN5 CACYBPP2-201ENST00000453625 678 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.56□□□□□ -2
CCDC28BQ9BUN5 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.56□□□□□ -2
CCDC28BQ9BUN5 AL160314.1-201ENST00000490836 438 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 AC026427.2-201ENST00000506228 536 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 RAC1P5-201ENST00000512182 576 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 RNU6-1282P-201ENST00000516735 96 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.56□□□□□ -2
CCDC28BQ9BUN5 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.56□□□□□ -2
CCDC28BQ9BUN5 AP001646.1-201ENST00000527936 915 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.56□□□□□ -2
CCDC28BQ9BUN5 AC087241.2-201ENST00000535801 324 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.56□□□□□ -2
CCDC28BQ9BUN5 AP003465.2-201ENST00000602571 373 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 AC012507.3-201ENST00000603556 477 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 AC007363.1-201ENST00000604736 620 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 AC007619.2-201ENST00000605743 379 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 AL121992.2-201ENST00000606262 256 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 AC004492.1-201ENST00000607036 742 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 MTND1P37-201ENST00000636562 264 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 OR5H6-203ENST00000642105 978 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 TPTE2P4-201ENST00000258589 1605 ntBASIC2.56□□□□□ -2
CCDC28BQ9BUN5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC28BQ9BUN5 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.55□□□□□ -2
CCDC28BQ9BUN5 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC28BQ9BUN5 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC28BQ9BUN5 RNU4-48P-201ENST00000365559 182 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 MIR1-2-201ENST00000384961 85 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 MIR134-201ENST00000385258 73 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.55□□□□□ -2
CCDC28BQ9BUN5 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC28BQ9BUN5 AL138827.1-201ENST00000402666 306 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 RNU6-648P-201ENST00000410190 107 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 Y_RNA.619-201ENST00000410951 90 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.55□□□□□ -2
CCDC28BQ9BUN5 AC092017.2-201ENST00000427600 362 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 MTATP6P16-201ENST00000434543 526 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 MTND4P5-201ENST00000435821 1374 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CCDC28BQ9BUN5 Z82210.1-201ENST00000440037 231 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.55□□□□□ -2
CCDC28BQ9BUN5 AC011816.1-201ENST00000441346 546 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.55□□□□□ -2
CCDC28BQ9BUN5 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.55□□□□□ -2
CCDC28BQ9BUN5 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.55□□□□□ -2
CCDC28BQ9BUN5 AL356010.1-201ENST00000456364 102 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 RPL37P6-201ENST00000460682 294 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 RPS3AP14-201ENST00000483907 780 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.55□□□□□ -2
CCDC28BQ9BUN5 TTC39CP1-201ENST00000512513 755 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 AC108043.1-201ENST00000512696 574 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 RNU6-677P-201ENST00000516914 101 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.55□□□□□ -2
CCDC28BQ9BUN5 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.55□□□□□ -2
CCDC28BQ9BUN5 AL512310.1-201ENST00000548639 172 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.55□□□□□ -2
CCDC28BQ9BUN5 TRAV28-201ENST00000557548 323 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.55□□□□□ -2
CCDC28BQ9BUN5 AC136619.2-201ENST00000563361 631 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.55□□□□□ -2
CCDC28BQ9BUN5 TPRKBP2-201ENST00000565969 475 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.55□□□□□ -2
CCDC28BQ9BUN5 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.55□□□□□ -2
CCDC28BQ9BUN5 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.55□□□□□ -2
CCDC28BQ9BUN5 DPPA3P3-201ENST00000603842 430 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 AC025449.1-201ENST00000603896 529 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 Z84480.1-201ENST00000605131 311 ntBASIC2.55□□□□□ -2
CCDC28BQ9BUN5 AP001330.5-201ENST00000607176 411 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms