Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.79□□□□□ -2.28
VPS25Q9BRG1 RNU6-1164P-201ENST00000364428 107 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 SNORD115-48-201ENST00000364764 76 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 RPL22P22-201ENST00000395439 379 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 AL627390.1-201ENST00000396055 340 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 TXNP7-201ENST00000406296 293 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC0.79□□□□□ -2.28
VPS25Q9BRG1 USP9YP26-201ENST00000421008 661 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 MTCO3P1-205ENST00000422088 832 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 USP9YP18-201ENST00000425912 695 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 MTND1P28-201ENST00000435623 950 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 RPL32P28-201ENST00000443577 397 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 USP9YP17-201ENST00000444617 696 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 AC092001.1-201ENST00000453012 261 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 MEMO1P3-201ENST00000459811 302 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 RPL31P50-201ENST00000471002 296 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 AC092902.1-201ENST00000486999 259 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 RNU1-92P-201ENST00000517017 135 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 CENPUP1-201ENST00000526649 1202 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.79□□□□□ -2.28
VPS25Q9BRG1 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.79□□□□□ -2.28
VPS25Q9BRG1 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.79□□□□□ -2.28
VPS25Q9BRG1 AC023813.2-201ENST00000564321 469 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 CLIC4P2-201ENST00000601934 717 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 BBIP1P1-201ENST00000602999 279 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 AC091946.2-201ENST00000606105 291 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 AL022345.1-201ENST00000607292 135 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
VPS25Q9BRG1 AC091834.1-201ENST00000614543 472 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.79□□□□□ -2.28
VPS25Q9BRG1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.79□□□□□ -2.28
VPS25Q9BRG1 ZNF355P-201ENST00000427301 3216 ntBASIC0.79□□□□□ -2.28
VPS25Q9BRG1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
VPS25Q9BRG1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
VPS25Q9BRG1 RNU1-124P-201ENST00000363861 145 ntBASIC0.78□□□□□ -2.28
VPS25Q9BRG1 SNORD1A-201ENST00000364968 72 ntBASIC0.78□□□□□ -2.28
VPS25Q9BRG1 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.78□□□□□ -2.28
VPS25Q9BRG1 SNORA29-201ENST00000384183 140 ntBASIC0.78□□□□□ -2.28
VPS25Q9BRG1 RNU6-658P-201ENST00000384606 106 ntBASIC0.78□□□□□ -2.28
VPS25Q9BRG1 RNA5SP508-201ENST00000411327 119 ntBASIC0.78□□□□□ -2.28
VPS25Q9BRG1 OR6C66P-201ENST00000414917 930 ntBASIC0.78□□□□□ -2.28
VPS25Q9BRG1 AC007435.1-201ENST00000421086 415 ntBASIC0.78□□□□□ -2.28
VPS25Q9BRG1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.78□□□□□ -2.28
VPS25Q9BRG1 AC027119.1-201ENST00000440877 241 ntBASIC0.78□□□□□ -2.28
VPS25Q9BRG1 AC021382.1-201ENST00000483523 359 ntBASIC0.78□□□□□ -2.28
VPS25Q9BRG1 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC0.78□□□□□ -2.28
VPS25Q9BRG1 RNU6-678P-201ENST00000516832 109 ntBASIC0.78□□□□□ -2.28
VPS25Q9BRG1 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.78□□□□□ -2.28
VPS25Q9BRG1 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC0.78□□□□□ -2.28
VPS25Q9BRG1 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC0.78□□□□□ -2.28
VPS25Q9BRG1 AC084824.4-201ENST00000620106 731 ntBASIC0.78□□□□□ -2.28
VPS25Q9BRG1 AC097655.1-201ENST00000635075 318 ntBASIC0.78□□□□□ -2.28
VPS25Q9BRG1 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.78□□□□□ -2.28
VPS25Q9BRG1 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.78□□□□□ -2.28
VPS25Q9BRG1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC0.78□□□□□ -2.29
VPS25Q9BRG1 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC0.77□□□□□ -2.29
VPS25Q9BRG1 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC0.77□□□□□ -2.29
VPS25Q9BRG1 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.77□□□□□ -2.29
VPS25Q9BRG1 AC013410.2-201ENST00000422627 201 ntBASIC0.77□□□□□ -2.29
VPS25Q9BRG1 AC234064.1-201ENST00000436312 247 ntBASIC0.77□□□□□ -2.29
VPS25Q9BRG1 USP9YP22-201ENST00000438971 294 ntBASIC0.77□□□□□ -2.29
VPS25Q9BRG1 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC0.77□□□□□ -2.29
VPS25Q9BRG1 RPS4XP11-201ENST00000446897 772 ntBASIC0.77□□□□□ -2.29
VPS25Q9BRG1 COX6CP18-201ENST00000448769 222 ntBASIC0.77□□□□□ -2.29
VPS25Q9BRG1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.77□□□□□ -2.29
VPS25Q9BRG1 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
VPS25Q9BRG1 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
VPS25Q9BRG1 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
VPS25Q9BRG1 RNVU1-2-201ENST00000516326 135 ntBASIC0.77□□□□□ -2.29
VPS25Q9BRG1 SNORA31.17-201ENST00000516953 127 ntBASIC0.77□□□□□ -2.29
VPS25Q9BRG1 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.77□□□□□ -2.29
VPS25Q9BRG1 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.77□□□□□ -2.29
VPS25Q9BRG1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC0.77□□□□□ -2.29
VPS25Q9BRG1 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC0.77□□□□□ -2.29
VPS25Q9BRG1 MIR3162-201ENST00000581818 82 ntBASIC0.77□□□□□ -2.29
VPS25Q9BRG1 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.77□□□□□ -2.29
VPS25Q9BRG1 AC013244.2-201ENST00000603396 103 ntBASIC0.77□□□□□ -2.29
VPS25Q9BRG1 AL020996.3-201ENST00000606617 222 ntBASIC0.77□□□□□ -2.29
VPS25Q9BRG1 AC004492.1-201ENST00000607036 742 ntBASIC0.77□□□□□ -2.29
VPS25Q9BRG1 AC006213.5-201ENST00000619673 288 ntBASIC0.77□□□□□ -2.29
VPS25Q9BRG1 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
VPS25Q9BRG1 ZNF72P-201ENST00000425869 1908 ntBASIC0.77□□□□□ -2.29
VPS25Q9BRG1 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.76□□□□□ -2.29
VPS25Q9BRG1 RNU6-839P-201ENST00000363347 108 ntBASIC0.76□□□□□ -2.29
VPS25Q9BRG1 RNU6-26P-201ENST00000383985 107 ntBASIC0.76□□□□□ -2.29
VPS25Q9BRG1 RNU6-611P-201ENST00000384276 104 ntBASIC0.76□□□□□ -2.29
VPS25Q9BRG1 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
VPS25Q9BRG1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
VPS25Q9BRG1 SNORD65C-201ENST00000390962 71 ntBASIC0.76□□□□□ -2.29
VPS25Q9BRG1 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.76□□□□□ -2.29
VPS25Q9BRG1 AL139421.1-201ENST00000423010 169 ntBASIC0.76□□□□□ -2.29
VPS25Q9BRG1 ELOCP14-201ENST00000428070 331 ntBASIC0.76□□□□□ -2.29
VPS25Q9BRG1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.76□□□□□ -2.29
VPS25Q9BRG1 ELOCP7-201ENST00000439968 331 ntBASIC0.76□□□□□ -2.29
VPS25Q9BRG1 RPL9P9-202ENST00000466501 579 ntBASIC0.76□□□□□ -2.29
VPS25Q9BRG1 AC068587.2-201ENST00000478386 781 ntBASIC0.76□□□□□ -2.29
VPS25Q9BRG1 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.76□□□□□ -2.29
VPS25Q9BRG1 AC117522.2-201ENST00000510049 657 ntBASIC0.76□□□□□ -2.29
VPS25Q9BRG1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms