Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 RPL21P66-201ENST00000426566 466 ntBASIC0.33□□□□□ -2.36
COL12A1Q99715 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.33□□□□□ -2.36
COL12A1Q99715 AC139453.3-201ENST00000493276 369 ntBASIC0.33□□□□□ -2.36
COL12A1Q99715 SNORA62.5-201ENST00000516634 120 ntBASIC0.33□□□□□ -2.36
COL12A1Q99715 AP006587.4-201ENST00000526053 529 ntBASIC0.33□□□□□ -2.36
COL12A1Q99715 AP001180.6-201ENST00000584918 159 ntBASIC0.33□□□□□ -2.36
COL12A1Q99715 Y_RNA.203-201ENST00000364106 102 ntBASIC0.32□□□□□ -2.36
COL12A1Q99715 RPS4XP3-201ENST00000398541 413 ntBASIC0.32□□□□□ -2.36
COL12A1Q99715 TRAPPC2P4-201ENST00000421750 331 ntBASIC0.32□□□□□ -2.36
COL12A1Q99715 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.32□□□□□ -2.36
COL12A1Q99715 DYNLT3P2-201ENST00000442517 295 ntBASIC0.32□□□□□ -2.36
COL12A1Q99715 SNORD57-201ENST00000448188 72 ntBASIC0.32□□□□□ -2.36
COL12A1Q99715 AC087588.1-201ENST00000462203 316 ntBASIC0.32□□□□□ -2.36
COL12A1Q99715 AC112518.2-201ENST00000508565 425 ntBASIC0.32□□□□□ -2.36
COL12A1Q99715 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.32□□□□□ -2.36
COL12A1Q99715 AC093027.1-201ENST00000546698 429 ntBASIC0.32□□□□□ -2.36
COL12A1Q99715 AC004987.4-201ENST00000603383 338 ntBASIC0.32□□□□□ -2.36
COL12A1Q99715 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.32□□□□□ -2.36
COL12A1Q99715 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
COL12A1Q99715 Y_RNA.146-201ENST00000363549 102 ntBASIC0.32□□□□□ -2.36
COL12A1Q99715 RNU6-1184P-201ENST00000384588 108 ntBASIC0.32□□□□□ -2.36
COL12A1Q99715 RPL23AP95-201ENST00000426806 265 ntBASIC0.32□□□□□ -2.36
COL12A1Q99715 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.32□□□□□ -2.36
COL12A1Q99715 MTCYBP41-201ENST00000528913 1123 ntBASIC0.32□□□□□ -2.36
COL12A1Q99715 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
COL12A1Q99715 AL138726.1-201ENST00000614873 333 ntBASIC0.32□□□□□ -2.36
COL12A1Q99715 Y_RNA.204-201ENST00000364112 102 ntBASIC0.32□□□□□ -2.36
COL12A1Q99715 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.32□□□□□ -2.36
COL12A1Q99715 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.32□□□□□ -2.36
COL12A1Q99715 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.32□□□□□ -2.36
COL12A1Q99715 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
COL12A1Q99715 AC097372.5-201ENST00000623665 376 ntBASIC0.32□□□□□ -2.36
COL12A1Q99715 AC087821.2-201ENST00000637086 450 ntBASIC0.32□□□□□ -2.36
COL12A1Q99715 AC010099.3-201ENST00000423896 409 ntBASIC0.31□□□□□ -2.36
COL12A1Q99715 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.31□□□□□ -2.36
COL12A1Q99715 PRPS1P1-201ENST00000445305 876 ntBASIC0.31□□□□□ -2.36
COL12A1Q99715 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.31□□□□□ -2.36
COL12A1Q99715 CYCTP-201ENST00000504253 315 ntBASIC0.31□□□□□ -2.36
COL12A1Q99715 RNU6-1073P-201ENST00000517182 106 ntBASIC0.31□□□□□ -2.36
COL12A1Q99715 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
COL12A1Q99715 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC0.31□□□□□ -2.36
COL12A1Q99715 AL355472.4-201ENST00000610233 626 ntBASIC0.31□□□□□ -2.36
COL12A1Q99715 HSBP1P2-201ENST00000299671 229 ntBASIC0.31□□□□□ -2.36
COL12A1Q99715 RNU1-96P-201ENST00000364163 162 ntBASIC0.31□□□□□ -2.36
COL12A1Q99715 Y_RNA.476-201ENST00000384347 108 ntBASIC0.31□□□□□ -2.36
COL12A1Q99715 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.31□□□□□ -2.36
COL12A1Q99715 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.31□□□□□ -2.36
COL12A1Q99715 AP000811.1-201ENST00000603803 651 ntBASIC0.31□□□□□ -2.36
COL12A1Q99715 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
COL12A1Q99715 AC106800.4-201ENST00000614905 153 ntBASIC0.31□□□□□ -2.36
COL12A1Q99715 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.3□□□□□ -2.36
COL12A1Q99715 RNU6-322P-201ENST00000516010 103 ntBASIC0.3□□□□□ -2.36
COL12A1Q99715 CENPUP1-201ENST00000526649 1202 ntBASIC0.3□□□□□ -2.36
COL12A1Q99715 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.3□□□□□ -2.36
COL12A1Q99715 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.3□□□□□ -2.36
COL12A1Q99715 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.3□□□□□ -2.36
COL12A1Q99715 AC008163.1-202ENST00000636004 2889 ntBASIC0.3□□□□□ -2.36
COL12A1Q99715 RPS3AP36-201ENST00000398190 775 ntBASIC0.3□□□□□ -2.36
COL12A1Q99715 OR2A41P-201ENST00000473586 105 ntBASIC0.3□□□□□ -2.36
COL12A1Q99715 MTATP6P22-201ENST00000507369 598 ntBASIC0.3□□□□□ -2.36
COL12A1Q99715 SNORA44.1-201ENST00000517031 108 ntBASIC0.3□□□□□ -2.36
COL12A1Q99715 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC0.3□□□□□ -2.36
COL12A1Q99715 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.3□□□□□ -2.36
COL12A1Q99715 AGGF1P5-201ENST00000567900 919 ntBASIC0.3□□□□□ -2.36
COL12A1Q99715 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.3□□□□□ -2.36
COL12A1Q99715 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.3□□□□□ -2.36
COL12A1Q99715 AC243960.4-201ENST00000600532 288 ntBASIC0.3□□□□□ -2.36
COL12A1Q99715 AC068880.5-201ENST00000624331 290 ntBASIC0.3□□□□□ -2.36
COL12A1Q99715 AC112487.2-201ENST00000637950 304 ntBASIC0.3□□□□□ -2.36
COL12A1Q99715 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
COL12A1Q99715 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
COL12A1Q99715 SNORA50A-201ENST00000384225 134 ntBASIC0.29□□□□□ -2.36
COL12A1Q99715 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.29□□□□□ -2.36
COL12A1Q99715 UBE2V2P3-201ENST00000433562 437 ntBASIC0.29□□□□□ -2.36
COL12A1Q99715 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.29□□□□□ -2.36
COL12A1Q99715 AC087477.1-201ENST00000465747 340 ntBASIC0.29□□□□□ -2.36
COL12A1Q99715 NCOR1P1-202ENST00000486162 291 ntBASIC0.29□□□□□ -2.36
COL12A1Q99715 Y_RNA.352-201ENST00000365439 102 ntBASIC0.29□□□□□ -2.36
COL12A1Q99715 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.29□□□□□ -2.36
COL12A1Q99715 RNU6-362P-201ENST00000516736 90 ntBASIC0.29□□□□□ -2.36
COL12A1Q99715 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.29□□□□□ -2.36
COL12A1Q99715 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC0.29□□□□□ -2.36
COL12A1Q99715 BNIP3P16-201ENST00000589779 534 ntBASIC0.29□□□□□ -2.36
COL12A1Q99715 AL355812.1-201ENST00000603215 216 ntBASIC0.29□□□□□ -2.36
COL12A1Q99715 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC0.29□□□□□ -2.36
COL12A1Q99715 AC245060.5-201ENST00000610778 3293 ntBASIC0.29□□□□□ -2.36
COL12A1Q99715 RNU4-78P-201ENST00000410940 126 ntBASIC0.29□□□□□ -2.36
COL12A1Q99715 AL121578.1-201ENST00000428051 892 ntBASIC0.29□□□□□ -2.36
COL12A1Q99715 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.29□□□□□ -2.36
COL12A1Q99715 AC079140.2-201ENST00000506193 142 ntBASIC0.29□□□□□ -2.36
COL12A1Q99715 AC002545.1-201ENST00000592511 181 ntBASIC0.29□□□□□ -2.36
COL12A1Q99715 AL773524.1-201ENST00000614065 229 ntBASIC0.29□□□□□ -2.36
COL12A1Q99715 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.29□□□□□ -2.36
COL12A1Q99715 RNU6-1104P-201ENST00000384723 104 ntBASIC0.28□□□□□ -2.36
COL12A1Q99715 MTND4P6-201ENST00000438297 472 ntBASIC0.28□□□□□ -2.36
COL12A1Q99715 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.28□□□□□ -2.36
COL12A1Q99715 TPTE2P6-202ENST00000445572 1007 ntBASIC0.28□□□□□ -2.36
COL12A1Q99715 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.28□□□□□ -2.36
COL12A1Q99715 RPS27AP8-201ENST00000452665 445 ntBASIC0.28□□□□□ -2.36
COL12A1Q99715 RPL21P103-201ENST00000479921 488 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms