Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.23□□□□□ -2.05
RPRD1AQ96P16 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RPRD1AQ96P16 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.23□□□□□ -2.05
RPRD1AQ96P16 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
RPRD1AQ96P16 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
RPRD1AQ96P16 MTND5P30-201ENST00000452896 1731 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 AL391994.1-201ENST00000254724 282 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 Y_RNA.97-201ENST00000363094 102 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 RNU6-288P-201ENST00000363690 104 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 RNY3P13-201ENST00000365542 102 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 RNU6-19P-201ENST00000384718 107 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 U8.14-201ENST00000390843 143 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 SNORA48.3-201ENST00000391081 134 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 RN7SKP32-201ENST00000410167 303 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 ELOCP17-201ENST00000414751 326 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 RAC1P6-201ENST00000423911 575 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 FABP5P14-201ENST00000437273 393 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 AC004383.1-201ENST00000438135 289 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 AC092001.1-201ENST00000453012 261 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 AP001324.2-201ENST00000461163 319 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 RNU6-311P-201ENST00000516224 102 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 SCARNA1-201ENST00000517138 166 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 MIR3945-201ENST00000581853 98 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 AC105245.1-201ENST00000581934 244 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 AC112187.2-201ENST00000604345 283 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 AP000860.1-201ENST00000605250 559 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 uc_338.14-201ENST00000613162 166 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 PISRT1-201ENST00000626175 531 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 AC093591.3-201ENST00000634516 308 ntBASIC2.22□□□□□ -2.05
RPRD1AQ96P16 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RPRD1AQ96P16 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.21□□□□□ -2.06
RPRD1AQ96P16 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RPRD1AQ96P16 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RPRD1AQ96P16 SNORD113-6-201ENST00000363345 75 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 RNU6-1200P-201ENST00000384162 107 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 MIR147B-201ENST00000390185 80 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 RNU6-817P-201ENST00000391083 104 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 RPS20P2-201ENST00000402520 389 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 FCF1P10-201ENST00000407590 479 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 RNU2-36P-201ENST00000410361 191 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 HMGB3P2-201ENST00000411913 584 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 NPM1P11-201ENST00000417106 855 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 OOSP1P1-201ENST00000423265 274 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.21□□□□□ -2.06
RPRD1AQ96P16 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.21□□□□□ -2.06
RPRD1AQ96P16 PTGES3P4-201ENST00000426243 356 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.21□□□□□ -2.06
RPRD1AQ96P16 MTND4P25-201ENST00000441039 533 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 AC080013.2-201ENST00000460866 323 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 RPL39P36-201ENST00000490784 156 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 RNU6-1003P-201ENST00000517099 105 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
RPRD1AQ96P16 AC009902.1-201ENST00000519351 183 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 AC084851.1-201ENST00000529105 249 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 CYCSP26-201ENST00000534107 320 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.21□□□□□ -2.06
RPRD1AQ96P16 AL138976.2-201ENST00000563989 694 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 MIR4648-201ENST00000580107 72 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 AL109809.4-201ENST00000603520 2185 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 AC107952.2-201ENST00000606048 486 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 AC069294.1-201ENST00000608397 350 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 AL359854.1-201ENST00000614203 1594 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 AC010378.1-201ENST00000619270 362 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 AL031667.3-201ENST00000620124 655 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 AC025048.6-202ENST00000627667 438 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 U6.99-201ENST00000637524 83 ntBASIC2.21□□□□□ -2.06
RPRD1AQ96P16 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.21□□□□□ -2.06
RPRD1AQ96P16 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
RPRD1AQ96P16 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RPRD1AQ96P16 RNY4P24-201ENST00000362735 96 ntBASIC2.2□□□□□ -2.06
RPRD1AQ96P16 RNU6-660P-201ENST00000364566 109 ntBASIC2.2□□□□□ -2.06
RPRD1AQ96P16 SMIM11P1-201ENST00000369586 178 ntBASIC2.2□□□□□ -2.06
RPRD1AQ96P16 SNORA64-201ENST00000384674 134 ntBASIC2.2□□□□□ -2.06
RPRD1AQ96P16 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
RPRD1AQ96P16 RPS12P24-201ENST00000412619 387 ntBASIC2.2□□□□□ -2.06
RPRD1AQ96P16 AC005005.2-201ENST00000420779 380 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms