Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
IFT43Q96FT9 AC007785.2-201ENST00000598627 1916 ntBASIC4.83□□□□□ -1.64
IFT43Q96FT9 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
IFT43Q96FT9 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
IFT43Q96FT9 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.83□□□□□ -1.64
IFT43Q96FT9 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
IFT43Q96FT9 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.82□□□□□ -1.64
IFT43Q96FT9 AL672167.1-203ENST00000641299 2975 ntBASIC4.82□□□□□ -1.64
IFT43Q96FT9 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
IFT43Q96FT9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
IFT43Q96FT9 MIR411-201ENST00000362239 96 ntBASIC4.82□□□□□ -1.64
IFT43Q96FT9 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
IFT43Q96FT9 Y_RNA.506-201ENST00000384494 102 ntBASIC4.82□□□□□ -1.64
IFT43Q96FT9 RNU1-82P-201ENST00000390851 165 ntBASIC4.82□□□□□ -1.64
IFT43Q96FT9 BTF3L4P2-201ENST00000392798 346 ntBASIC4.82□□□□□ -1.64
IFT43Q96FT9 RNU2-68P-201ENST00000410878 191 ntBASIC4.82□□□□□ -1.64
IFT43Q96FT9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.82□□□□□ -1.64
IFT43Q96FT9 AL590383.1-201ENST00000428602 75 ntBASIC4.82□□□□□ -1.64
IFT43Q96FT9 DNAJC19P7-201ENST00000428811 344 ntBASIC4.82□□□□□ -1.64
IFT43Q96FT9 AC007389.2-201ENST00000434630 306 ntBASIC4.82□□□□□ -1.64
IFT43Q96FT9 AC005154.2-201ENST00000438110 379 ntBASIC4.82□□□□□ -1.64
IFT43Q96FT9 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.82□□□□□ -1.64
IFT43Q96FT9 U8.22-201ENST00000459141 133 ntBASIC4.82□□□□□ -1.64
IFT43Q96FT9 SCARNA10-201ENST00000459255 330 ntBASIC4.82□□□□□ -1.64
IFT43Q96FT9 RPL7P49-201ENST00000471402 708 ntBASIC4.82□□□□□ -1.64
IFT43Q96FT9 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
IFT43Q96FT9 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.82□□□□□ -1.64
IFT43Q96FT9 AC108043.1-201ENST00000512696 574 ntBASIC4.82□□□□□ -1.64
IFT43Q96FT9 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.82□□□□□ -1.64
IFT43Q96FT9 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.82□□□□□ -1.64
IFT43Q96FT9 AP001880.2-201ENST00000538233 448 ntBASIC4.82□□□□□ -1.64
IFT43Q96FT9 AC090617.3-201ENST00000573670 475 ntBASIC4.82□□□□□ -1.64
IFT43Q96FT9 MIR4643-201ENST00000577473 78 ntBASIC4.82□□□□□ -1.64
IFT43Q96FT9 MIR5096-201ENST00000583713 70 ntBASIC4.82□□□□□ -1.64
IFT43Q96FT9 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.82□□□□□ -1.64
IFT43Q96FT9 MIR6810-201ENST00000622701 70 ntBASIC4.82□□□□□ -1.64
IFT43Q96FT9 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.82□□□□□ -1.64
IFT43Q96FT9 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.82□□□□□ -1.64
IFT43Q96FT9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
IFT43Q96FT9 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
IFT43Q96FT9 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.82□□□□□ -1.64
IFT43Q96FT9 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.82□□□□□ -1.64
IFT43Q96FT9 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
IFT43Q96FT9 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
IFT43Q96FT9 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
IFT43Q96FT9 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
IFT43Q96FT9 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
IFT43Q96FT9 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.81□□□□□ -1.64
IFT43Q96FT9 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
IFT43Q96FT9 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.81□□□□□ -1.64
IFT43Q96FT9 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
IFT43Q96FT9 RNA5SP191-201ENST00000362585 102 ntBASIC4.81□□□□□ -1.64
IFT43Q96FT9 RNU1-20P-201ENST00000363314 162 ntBASIC4.81□□□□□ -1.64
IFT43Q96FT9 SNORD113-8-201ENST00000363497 74 ntBASIC4.81□□□□□ -1.64
IFT43Q96FT9 RNA5SP505-201ENST00000364748 108 ntBASIC4.81□□□□□ -1.64
IFT43Q96FT9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
IFT43Q96FT9 AL079342.1-201ENST00000401460 267 ntBASIC4.81□□□□□ -1.64
IFT43Q96FT9 Y_RNA.602-201ENST00000410535 92 ntBASIC4.81□□□□□ -1.64
IFT43Q96FT9 TOMM22P1-201ENST00000418578 312 ntBASIC4.81□□□□□ -1.64
IFT43Q96FT9 AC098614.2-201ENST00000426040 255 ntBASIC4.81□□□□□ -1.64
IFT43Q96FT9 AC068287.1-201ENST00000430283 295 ntBASIC4.81□□□□□ -1.64
IFT43Q96FT9 RPS6P12-201ENST00000432491 726 ntBASIC4.81□□□□□ -1.64
IFT43Q96FT9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.81□□□□□ -1.64
IFT43Q96FT9 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.81□□□□□ -1.64
IFT43Q96FT9 SCARNA22-201ENST00000503991 125 ntBASIC4.81□□□□□ -1.64
IFT43Q96FT9 AC091868.1-201ENST00000508746 304 ntBASIC4.81□□□□□ -1.64
IFT43Q96FT9 AC107393.1-201ENST00000512403 346 ntBASIC4.81□□□□□ -1.64
IFT43Q96FT9 AC010265.1-201ENST00000513509 211 ntBASIC4.81□□□□□ -1.64
IFT43Q96FT9 SNORA31.18-201ENST00000517043 134 ntBASIC4.81□□□□□ -1.64
IFT43Q96FT9 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.81□□□□□ -1.64
IFT43Q96FT9 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.81□□□□□ -1.64
IFT43Q96FT9 AC073657.2-201ENST00000605661 303 ntBASIC4.81□□□□□ -1.64
IFT43Q96FT9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.81□□□□□ -1.64
IFT43Q96FT9 MIR7703-201ENST00000620784 77 ntBASIC4.81□□□□□ -1.64
IFT43Q96FT9 AC027309.3-201ENST00000623419 351 ntBASIC4.81□□□□□ -1.64
IFT43Q96FT9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.81□□□□□ -1.64
IFT43Q96FT9 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
IFT43Q96FT9 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
IFT43Q96FT9 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
IFT43Q96FT9 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.81□□□□□ -1.64
IFT43Q96FT9 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.81□□□□□ -1.64
IFT43Q96FT9 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
IFT43Q96FT9 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
IFT43Q96FT9 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.8□□□□□ -1.64
IFT43Q96FT9 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.8□□□□□ -1.64
IFT43Q96FT9 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
IFT43Q96FT9 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
IFT43Q96FT9 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
IFT43Q96FT9 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
IFT43Q96FT9 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
IFT43Q96FT9 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.8□□□□□ -1.64
IFT43Q96FT9 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
IFT43Q96FT9 RNU6-78P-201ENST00000362897 107 ntBASIC4.8□□□□□ -1.64
IFT43Q96FT9 RNU6-1159P-201ENST00000362933 107 ntBASIC4.8□□□□□ -1.64
IFT43Q96FT9 RNU4-9P-201ENST00000364951 139 ntBASIC4.8□□□□□ -1.64
IFT43Q96FT9 SNORD113-1-201ENST00000365321 69 ntBASIC4.8□□□□□ -1.64
IFT43Q96FT9 RNU6-1181P-201ENST00000384191 106 ntBASIC4.8□□□□□ -1.64
IFT43Q96FT9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
IFT43Q96FT9 SNORD78.2-201ENST00000391076 69 ntBASIC4.8□□□□□ -1.64
IFT43Q96FT9 AL033519.2-201ENST00000403958 392 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms