Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 USP9YP28-201ENST00000435142 589 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 SNRPEP9-201ENST00000436794 238 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 MTATP6P13-201ENST00000438531 667 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 AC008264.1-201ENST00000447612 367 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 DPPA3P1-201ENST00000448050 469 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 AC073415.1-201ENST00000449240 153 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 FABP5P15-201ENST00000453566 214 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 AC083798.1-201ENST00000472671 131 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 AC109927.2-201ENST00000506416 303 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 SNORA40.12-201ENST00000516329 111 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 RNU6-56P-201ENST00000516986 93 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 RNA5SP380-201ENST00000517190 98 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 AC010620.2-201ENST00000600135 313 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 FTX_3.1-201ENST00000610451 147 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 HSPA8P4-201ENST00000511877 1920 ntBASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 NACAP2-201ENST00000318548 624 ntBASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 RNU6-1068P-201ENST00000410958 103 ntBASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 RNU6-387P-201ENST00000411331 105 ntBASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 USP9YP18-201ENST00000425912 695 ntBASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 RNU7-23P-201ENST00000459465 62 ntBASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 GMFBP1-201ENST00000467831 427 ntBASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 RPS29P20-201ENST00000489592 171 ntBASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 AC098591.2-201ENST00000510152 315 ntBASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 AP005435.4-201ENST00000529514 284 ntBASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 OR5BN1P-201ENST00000532955 829 ntBASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 AC015917.1-201ENST00000579654 510 ntBASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 MIR5583-1-201ENST00000580941 59 ntBASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 AP003465.2-201ENST00000602571 373 ntBASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 AC007014.2-201ENST00000615581 479 ntBASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 AL356321.1-201ENST00000621360 228 ntBASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 YWHAEP7-203ENST00000622054 312 ntBASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.29□□□□□ -1.88
SH3KBP1Q96B97 AL354685.2-201ENST00000448218 1447 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 AC017071.1-201ENST00000564407 2204 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 Y_RNA.256-201ENST00000364594 104 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 SNORD21-201ENST00000383953 95 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 NDUFB4P4-201ENST00000404822 243 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 AL031121.1-201ENST00000406553 254 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 RNU6-193P-201ENST00000410977 107 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 BX323014.1-201ENST00000412876 237 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 AL356968.1-201ENST00000416622 474 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 AC104058.1-201ENST00000448028 297 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 RPS4XP2-201ENST00000458402 793 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 SNORA59A-201ENST00000459326 152 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 RN7SL442P-201ENST00000473804 320 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 RNU6-1178P-201ENST00000516674 107 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 MIR2276-201ENST00000516886 89 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 RNU6-685P-201ENST00000517088 95 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 HIF1AP1-201ENST00000553642 175 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 AL162413.1-201ENST00000603198 110 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 AL138889.2-201ENST00000603883 242 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 AP000907.4-201ENST00000604143 237 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 AL162713.1-201ENST00000604480 262 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 AC099506.2-201ENST00000623074 221 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 MIR3688-2-201ENST00000636963 87 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 MIR1321-201ENST00000637766 79 ntBASIC3.28□□□□□ -1.88
SH3KBP1Q96B97 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms