Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 RNU6-611P-201ENST00000384276 104 ntBASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 MTND3P9-201ENST00000429526 346 ntBASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 snoU13.24-201ENST00000458998 104 ntBASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 SNORA84-201ENST00000459229 133 ntBASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 RN7SL98P-201ENST00000462271 300 ntBASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 AC010285.1-201ENST00000470580 392 ntBASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 TRBVB-201ENST00000477100 408 ntBASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 AC108022.1-201ENST00000493466 478 ntBASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 AC025755.1-201ENST00000521306 278 ntBASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 AC004024.1-201ENST00000549244 247 ntBASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 RPL21P7-201ENST00000557463 483 ntBASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 MED28P6-201ENST00000558776 231 ntBASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 AL161629.2-201ENST00000615347 275 ntBASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 RLIMP1-201ENST00000339626 1680 ntBASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VTI1AQ96AJ9 NEAT1-202ENST00000501122 22743 ntBASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 USP8P1-201ENST00000494673 3183 ntBASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 Y_RNA.515-201ENST00000384535 112 ntBASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 MIR10A-201ENST00000385043 110 ntBASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 SDHCP2-201ENST00000398565 501 ntBASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 RAC1P3-201ENST00000416129 580 ntBASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 AC079354.2-201ENST00000453523 154 ntBASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 RPL21P104-201ENST00000464143 478 ntBASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 AC098869.1-201ENST00000481627 292 ntBASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 HMGB1P35-201ENST00000503360 598 ntBASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 MIR3653-201ENST00000625572 110 ntBASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VTI1AQ96AJ9 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
VTI1AQ96AJ9 Y_RNA.183-201ENST00000363882 113 ntBASIC5.06□□□□□ -1.6
VTI1AQ96AJ9 Y_RNA.245-201ENST00000364493 95 ntBASIC5.06□□□□□ -1.6
VTI1AQ96AJ9 RNA5SP366-201ENST00000365454 123 ntBASIC5.06□□□□□ -1.6
VTI1AQ96AJ9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.06□□□□□ -1.6
VTI1AQ96AJ9 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.06□□□□□ -1.6
VTI1AQ96AJ9 AL627311.1-201ENST00000431514 115 ntBASIC5.06□□□□□ -1.6
VTI1AQ96AJ9 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.06□□□□□ -1.6
VTI1AQ96AJ9 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.06□□□□□ -1.6
VTI1AQ96AJ9 RPL30P10-201ENST00000488148 337 ntBASIC5.06□□□□□ -1.6
VTI1AQ96AJ9 RPL21P13-201ENST00000488305 481 ntBASIC5.06□□□□□ -1.6
VTI1AQ96AJ9 AL160314.1-201ENST00000490836 438 ntBASIC5.06□□□□□ -1.6
VTI1AQ96AJ9 AC139453.3-201ENST00000493276 369 ntBASIC5.06□□□□□ -1.6
VTI1AQ96AJ9 RNU6-111P-201ENST00000517179 105 ntBASIC5.06□□□□□ -1.6
VTI1AQ96AJ9 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.06□□□□□ -1.6
VTI1AQ96AJ9 AC007458.1-201ENST00000542812 373 ntBASIC5.06□□□□□ -1.6
VTI1AQ96AJ9 AC015912.2-201ENST00000571053 181 ntBASIC5.06□□□□□ -1.6
VTI1AQ96AJ9 AC008121.1-201ENST00000603244 268 ntBASIC5.06□□□□□ -1.6
VTI1AQ96AJ9 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.06□□□□□ -1.6
VTI1AQ96AJ9 AC090132.2-201ENST00000615881 347 ntBASIC5.06□□□□□ -1.6
VTI1AQ96AJ9 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
VTI1AQ96AJ9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
VTI1AQ96AJ9 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
VTI1AQ96AJ9 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 AC126323.6-202ENST00000568092 3511 ntBASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 RNU6-428P-201ENST00000362942 107 ntBASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 RNU2-33P-201ENST00000410344 192 ntBASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 RNU4-61P-201ENST00000411243 107 ntBASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 NDUFB4P7-201ENST00000423198 363 ntBASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 MTCO3P29-201ENST00000432119 779 ntBASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 OR4C10P-201ENST00000434991 931 ntBASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 AK3P2-201ENST00000507976 429 ntBASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 AC074250.1-201ENST00000511117 192 ntBASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 RNU6-612P-201ENST00000516909 102 ntBASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 AP003730.1-201ENST00000524605 285 ntBASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 AC073410.2-201ENST00000603240 332 ntBASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 SRGNP1-201ENST00000603392 451 ntBASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 AC008962.1-201ENST00000605729 304 ntBASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 AC034229.5-201ENST00000624258 185 ntBASIC5.05□□□□□ -1.6
VTI1AQ96AJ9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms