| CLUAP1 | Q96AJ1 | SPAG5-AS1-202 | ENST00000424210 | 1551 nt | TSL 2 BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | LRRC9-202 | ENST00000445360 | 4717 nt | APPRIS P1 TSL 5 BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | LRRC49-224 | ENST00000560691 | 2531 nt | TSL 2 BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | RBBP6-202 | ENST00000348022 | 5739 nt | TSL 1 (best) BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | HDX-202 | ENST00000373177 | 2924 nt | APPRIS P1 TSL 1 (best) BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | RNU6-78P-201 | ENST00000362897 | 107 nt | BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | RNA5SP509-201 | ENST00000364577 | 119 nt | BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | RNU6-784P-201 | ENST00000384330 | 106 nt | BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | MIR513A2-201 | ENST00000385249 | 127 nt | BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | RNU6-1109P-201 | ENST00000391187 | 107 nt | BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | U3.42-201 | ENST00000408746 | 214 nt | BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AC010745.2-201 | ENST00000420404 | 839 nt | TSL 3 BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AL033380.1-201 | ENST00000442781 | 421 nt | TSL 2 BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | DCLRE1CP1-201 | ENST00000454630 | 470 nt | BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | RN7SL691P-201 | ENST00000494487 | 301 nt | BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AC109927.1-202 | ENST00000511951 | 282 nt | TSL 3 BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AC010265.1-201 | ENST00000513509 | 211 nt | BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | RNA5SP49-201 | ENST00000516450 | 115 nt | BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AC009812.2-201 | ENST00000517657 | 457 nt | BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AC087664.2-201 | ENST00000522898 | 551 nt | TSL 4 BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | PRH1-206 | ENST00000543626 | 710 nt | APPRIS P2 TSL 5 BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | CYCSP39-201 | ENST00000565821 | 309 nt | BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | MIR5096-201 | ENST00000583713 | 70 nt | BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AC092070.3-201 | ENST00000596041 | 337 nt | TSL 3 BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AC024153.1-201 | ENST00000603103 | 365 nt | BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AL356218.2-201 | ENST00000605264 | 187 nt | BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AC009318.2-201 | ENST00000610917 | 651 nt | BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | LINC01505-206 | ENST00000637046 | 4266 nt | TSL 5 BASIC | 5.42 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | DMXL2-202 | ENST00000449909 | 7465 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | CNTN6-201 | ENST00000350110 | 3814 nt | APPRIS P1 TSL 1 (best) BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | NRIP1-201 | ENST00000318948 | 7556 nt | APPRIS P1 TSL 2 BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | ZNF682-207 | ENST00000595736 | 1710 nt | TSL 2 BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | SET-203 | ENST00000372688 | 801 nt | TSL 2 BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | MIR141-201 | ENST00000384975 | 95 nt | BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AL160275.2-201 | ENST00000412010 | 394 nt | BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AC016397.1-201 | ENST00000412463 | 242 nt | BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AL591501.1-201 | ENST00000439992 | 495 nt | TSL 5 BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AC073910.1-201 | ENST00000445047 | 438 nt | BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | Z99127.1-202 | ENST00000448686 | 526 nt | TSL 2 BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | HMGB3P8-201 | ENST00000449709 | 577 nt | BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | RN7SL860P-201 | ENST00000473738 | 223 nt | BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AC083829.1-201 | ENST00000503756 | 657 nt | BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | PARP4P3-201 | ENST00000510265 | 317 nt | BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | RNA5SP154-201 | ENST00000516193 | 111 nt | BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | RNU1-103P-201 | ENST00000516502 | 125 nt | BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | CASP1P1-201 | ENST00000526345 | 212 nt | BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | LINC01630-204 | ENST00000582689 | 539 nt | TSL 4 BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | MIR5188-201 | ENST00000583467 | 113 nt | BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AC015813.4-201 | ENST00000610469 | 179 nt | BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AC243829.7-201 | ENST00000633081 | 225 nt | BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AC091534.1-201 | ENST00000548779 | 1751 nt | TSL 2 BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | SYNE2-203 | ENST00000357395 | 21555 nt | TSL 5 BASIC | 5.41 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | DTNA-208 | ENST00000554864 | 1680 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | CSRNP3-201 | ENST00000314499 | 11788 nt | APPRIS P1 TSL 5 BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | IPO11-202 | ENST00000409296 | 3564 nt | TSL 2 BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AC126755.2-208 | ENST00000327792 | 462 nt | BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AC138969.1-213 | ENST00000331436 | 462 nt | BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | RNU1-14P-201 | ENST00000362759 | 152 nt | BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | RNU6-778P-201 | ENST00000363269 | 103 nt | BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.276-201 | ENST00000364732 | 109 nt | BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | SCN1A-202 | ENST00000375405 | 8097 nt | APPRIS P3 TSL 5 BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | RNU1-73P-201 | ENST00000383971 | 164 nt | BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.485-201 | ENST00000384395 | 102 nt | BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | MIR93-201 | ENST00000385024 | 80 nt | BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | NDUFS5P4-201 | ENST00000412983 | 318 nt | BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AL160411.1-201 | ENST00000429853 | 400 nt | TSL 2 BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | RPS3AP46-201 | ENST00000448352 | 682 nt | BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AC009220.1-201 | ENST00000451614 | 275 nt | BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | RPS29P19-201 | ENST00000479709 | 171 nt | BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | LINC01337-201 | ENST00000515871 | 440 nt | TSL 3 BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | RAB9BP1-201 | ENST00000519581 | 626 nt | BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AC040926.1-201 | ENST00000530195 | 238 nt | BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AP002004.1-207 | ENST00000531371 | 526 nt | TSL 1 (best) BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | LINC02459-201 | ENST00000551761 | 474 nt | TSL 3 BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | IGKV2OR2-8-201 | ENST00000558710 | 300 nt | BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | UBE2Q2P8-201 | ENST00000560644 | 102 nt | BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AC114781.5-201 | ENST00000615297 | 108 nt | BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AC138627.2-201 | ENST00000624202 | 601 nt | BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AC008785.1-201 | ENST00000624475 | 456 nt | BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | TEX41-280 | ENST00000629185 | 591 nt | TSL 5 BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | AL589740.1-204 | ENST00000634677 | 630 nt | TSL 4 BASIC | 5.4 | □□□□□ -1.54 | | |
| CLUAP1 | Q96AJ1 | SNCA-213 | ENST00000618500 | 3022 nt | TSL 1 (best) BASIC | 5.4 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | AC007656.2-201 | ENST00000624902 | 4547 nt | BASIC | 5.4 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | NFAT5-203 | ENST00000393742 | 13067 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.4 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | PLCB1-233 | ENST00000637919 | 5074 nt | TSL 5 BASIC | 5.4 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | AP5M1-201 | ENST00000261558 | 11737 nt | APPRIS P1 TSL 1 (best) BASIC | 5.4 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | CUL1P1-201 | ENST00000509510 | 2425 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | ZNF700-202 | ENST00000482090 | 3113 nt | APPRIS ALT2 TSL 2 BASIC | 5.39 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | OSBPL6-201 | ENST00000190611 | 10513 nt | APPRIS P3 TSL 1 (best) BASIC | 5.39 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | ZGRF1-212 | ENST00000612287 | 2176 nt | TSL 1 (best) BASIC | 5.39 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | POLK-201 | ENST00000241436 | 5911 nt | APPRIS P1 TSL 1 (best) BASIC | 5.39 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | MFSD8-242 | ENST00000641690 | 4199 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | RNU6-428P-201 | ENST00000362942 | 107 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.126-201 | ENST00000363382 | 111 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | RNU6-336P-201 | ENST00000364891 | 107 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | BTF3L4P2-201 | ENST00000392798 | 346 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | HSPE1P12-201 | ENST00000412576 | 301 nt | BASIC | 5.39 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | AC010163.2-201 | ENST00000416341 | 381 nt | TSL 2 BASIC | 5.39 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | GAS5-208 | ENST00000425771 | 242 nt | TSL 3 BASIC | 5.39 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | AL132765.1-201 | ENST00000434165 | 553 nt | BASIC | 5.39 | □□□□□ -1.55 | | |