Protein–RNA interactions for Protein: Q969Q1

TRIM63, E3 ubiquitin-protein ligase TRIM63, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM63Q969Q1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM63Q969Q1 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.14□□□□□ -1.91
TRIM63Q969Q1 MIR1321-201ENST00000637766 79 ntBASIC3.14□□□□□ -1.91
TRIM63Q969Q1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM63Q969Q1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM63Q969Q1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM63Q969Q1 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.13□□□□□ -1.91
TRIM63Q969Q1 RNU4-66P-201ENST00000365199 138 ntBASIC3.13□□□□□ -1.91
TRIM63Q969Q1 MIR181A1-201ENST00000385026 110 ntBASIC3.13□□□□□ -1.91
TRIM63Q969Q1 RNA5SP219-201ENST00000390940 113 ntBASIC3.13□□□□□ -1.91
TRIM63Q969Q1 RPL21P3-201ENST00000395517 478 ntBASIC3.13□□□□□ -1.91
TRIM63Q969Q1 AL592114.1-201ENST00000403842 483 ntBASIC3.13□□□□□ -1.91
TRIM63Q969Q1 AF274854.1-201ENST00000413236 615 ntBASIC3.13□□□□□ -1.91
TRIM63Q969Q1 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM63Q969Q1 RPL30P4-201ENST00000429309 333 ntBASIC3.13□□□□□ -1.91
TRIM63Q969Q1 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.13□□□□□ -1.91
TRIM63Q969Q1 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM63Q969Q1 AL513533.1-201ENST00000453728 415 ntBASIC3.13□□□□□ -1.91
TRIM63Q969Q1 AC112771.1-201ENST00000463581 102 ntBASIC3.13□□□□□ -1.91
TRIM63Q969Q1 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.13□□□□□ -1.91
TRIM63Q969Q1 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM63Q969Q1 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.13□□□□□ -1.91
TRIM63Q969Q1 RNU5B-3P-201ENST00000516601 115 ntBASIC3.13□□□□□ -1.91
TRIM63Q969Q1 RN7SKP40-201ENST00000517211 242 ntBASIC3.13□□□□□ -1.91
TRIM63Q969Q1 SNORA31.23-201ENST00000517219 133 ntBASIC3.13□□□□□ -1.91
TRIM63Q969Q1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM63Q969Q1 CR383656.8-201ENST00000549046 145 ntBASIC3.13□□□□□ -1.91
TRIM63Q969Q1 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM63Q969Q1 MIR3138-201ENST00000585238 82 ntBASIC3.13□□□□□ -1.91
TRIM63Q969Q1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM63Q969Q1 AC024153.1-201ENST00000603103 365 ntBASIC3.13□□□□□ -1.91
TRIM63Q969Q1 APOOP1-201ENST00000604695 592 ntBASIC3.13□□□□□ -1.91
TRIM63Q969Q1 AL591034.3-201ENST00000605511 685 ntBASIC3.13□□□□□ -1.91
TRIM63Q969Q1 AC004492.1-201ENST00000607036 742 ntBASIC3.13□□□□□ -1.91
TRIM63Q969Q1 AC011944.2-201ENST00000624440 683 ntBASIC3.13□□□□□ -1.91
TRIM63Q969Q1 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM63Q969Q1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.13□□□□□ -1.91
TRIM63Q969Q1 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
TRIM63Q969Q1 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM63Q969Q1 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM63Q969Q1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM63Q969Q1 AL359854.1-201ENST00000614203 1594 ntBASIC3.12□□□□□ -1.91
TRIM63Q969Q1 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.12□□□□□ -1.91
TRIM63Q969Q1 Y_RNA.167-201ENST00000363735 109 ntBASIC3.12□□□□□ -1.91
TRIM63Q969Q1 SNORD56.5-201ENST00000364281 72 ntBASIC3.12□□□□□ -1.91
TRIM63Q969Q1 RNU6-843P-201ENST00000384454 104 ntBASIC3.12□□□□□ -1.91
TRIM63Q969Q1 MIR514A2-201ENST00000385131 88 ntBASIC3.12□□□□□ -1.91
TRIM63Q969Q1 MIR514A3-201ENST00000385132 88 ntBASIC3.12□□□□□ -1.91
TRIM63Q969Q1 RNU6-220P-201ENST00000390919 107 ntBASIC3.12□□□□□ -1.91
TRIM63Q969Q1 RAP1BP3-201ENST00000407180 549 ntBASIC3.12□□□□□ -1.91
TRIM63Q969Q1 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM63Q969Q1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM63Q969Q1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM63Q969Q1 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM63Q969Q1 MTCO1P20-201ENST00000425366 358 ntBASIC3.12□□□□□ -1.91
TRIM63Q969Q1 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM63Q969Q1 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM63Q969Q1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM63Q969Q1 AL445687.1-201ENST00000439946 251 ntBASIC3.12□□□□□ -1.91
TRIM63Q969Q1 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM63Q969Q1 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.12□□□□□ -1.91
TRIM63Q969Q1 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.12□□□□□ -1.91
TRIM63Q969Q1 AC117503.1-201ENST00000472241 394 ntBASIC3.12□□□□□ -1.91
TRIM63Q969Q1 RPL23AP45-201ENST00000476406 468 ntBASIC3.12□□□□□ -1.91
TRIM63Q969Q1 MTCYBP40-201ENST00000509390 1135 ntBASIC3.12□□□□□ -1.91
TRIM63Q969Q1 AC091826.1-201ENST00000514065 313 ntBASIC3.12□□□□□ -1.91
TRIM63Q969Q1 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.12□□□□□ -1.91
TRIM63Q969Q1 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM63Q969Q1 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM63Q969Q1 VN1R80P-201ENST00000597126 338 ntBASIC3.12□□□□□ -1.91
TRIM63Q969Q1 AL162413.1-201ENST00000603198 110 ntBASIC3.12□□□□□ -1.91
TRIM63Q969Q1 AP000787.2-201ENST00000604432 568 ntBASIC3.12□□□□□ -1.91
TRIM63Q969Q1 AL121917.1-203ENST00000605534 577 ntBASIC3.12□□□□□ -1.91
TRIM63Q969Q1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.12□□□□□ -1.91
TRIM63Q969Q1 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.12□□□□□ -1.91
TRIM63Q969Q1 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM63Q969Q1 AC010329.5-201ENST00000623497 2174 ntBASIC3.12□□□□□ -1.91
TRIM63Q969Q1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
TRIM63Q969Q1 MTND5P19-201ENST00000424872 1794 ntBASIC3.12□□□□□ -1.91
TRIM63Q969Q1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM63Q969Q1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
TRIM63Q969Q1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM63Q969Q1 U8.9-201ENST00000365667 134 ntBASIC3.11□□□□□ -1.91
TRIM63Q969Q1 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM63Q969Q1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM63Q969Q1 MICF-203ENST00000432679 129 ntBASIC3.11□□□□□ -1.91
TRIM63Q969Q1 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM63Q969Q1 AC073264.2-201ENST00000448886 166 ntBASIC3.11□□□□□ -1.91
TRIM63Q969Q1 RPL23AP11-201ENST00000475260 469 ntBASIC3.11□□□□□ -1.91
TRIM63Q969Q1 RPL36AP48-201ENST00000485521 314 ntBASIC3.11□□□□□ -1.91
TRIM63Q969Q1 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM63Q969Q1 AC082651.2-201ENST00000496833 166 ntBASIC3.11□□□□□ -1.91
TRIM63Q969Q1 SMURF2P1-201ENST00000514992 481 ntBASIC3.11□□□□□ -1.91
TRIM63Q969Q1 RNU6-579P-201ENST00000516879 102 ntBASIC3.11□□□□□ -1.91
TRIM63Q969Q1 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM63Q969Q1 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM63Q969Q1 CENPUP1-201ENST00000526649 1202 ntBASIC3.11□□□□□ -1.91
TRIM63Q969Q1 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM63Q969Q1 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM63Q969Q1 AC023050.3-201ENST00000541142 333 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms