Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 AC009961.3-201ENST00000449832 765 ntBASIC1.84□□□□□ -2.11
LINC01560Q8TB33 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.84□□□□□ -2.11
LINC01560Q8TB33 RNU7-125P-201ENST00000458760 62 ntBASIC1.84□□□□□ -2.11
LINC01560Q8TB33 RPS27P27-201ENST00000498779 255 ntBASIC1.84□□□□□ -2.11
LINC01560Q8TB33 AC112204.1-201ENST00000502591 103 ntBASIC1.84□□□□□ -2.11
LINC01560Q8TB33 AC098591.2-201ENST00000510152 315 ntBASIC1.84□□□□□ -2.11
LINC01560Q8TB33 RNU6-295P-201ENST00000516901 104 ntBASIC1.84□□□□□ -2.11
LINC01560Q8TB33 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.84□□□□□ -2.11
LINC01560Q8TB33 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
LINC01560Q8TB33 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.84□□□□□ -2.11
LINC01560Q8TB33 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.84□□□□□ -2.11
LINC01560Q8TB33 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.84□□□□□ -2.11
LINC01560Q8TB33 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.84□□□□□ -2.11
LINC01560Q8TB33 RPS3AP4-201ENST00000555161 764 ntBASIC1.84□□□□□ -2.11
LINC01560Q8TB33 AC103810.1-201ENST00000579873 453 ntBASIC1.84□□□□□ -2.11
LINC01560Q8TB33 AL356575.1-201ENST00000603008 283 ntBASIC1.84□□□□□ -2.11
LINC01560Q8TB33 AL161734.1-201ENST00000609720 557 ntBASIC1.84□□□□□ -2.11
LINC01560Q8TB33 AC087683.2-201ENST00000611384 326 ntBASIC1.84□□□□□ -2.11
LINC01560Q8TB33 DUSP12P1-201ENST00000612874 516 ntBASIC1.84□□□□□ -2.11
LINC01560Q8TB33 AC025594.3-201ENST00000613068 790 ntBASIC1.84□□□□□ -2.11
LINC01560Q8TB33 Y_RNA.783-201ENST00000613546 102 ntBASIC1.84□□□□□ -2.11
LINC01560Q8TB33 AC079416.3-201ENST00000624479 549 ntBASIC1.84□□□□□ -2.11
LINC01560Q8TB33 MIR7515-201ENST00000637837 67 ntBASIC1.84□□□□□ -2.11
LINC01560Q8TB33 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
LINC01560Q8TB33 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
LINC01560Q8TB33 AC110491.1-201ENST00000562191 2010 ntBASIC1.84□□□□□ -2.12
LINC01560Q8TB33 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.12
LINC01560Q8TB33 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
LINC01560Q8TB33 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
LINC01560Q8TB33 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.83□□□□□ -2.12
LINC01560Q8TB33 RNU6-288P-201ENST00000363690 104 ntBASIC1.83□□□□□ -2.12
LINC01560Q8TB33 RNU6-461P-201ENST00000364195 107 ntBASIC1.83□□□□□ -2.12
LINC01560Q8TB33 RNU6-188P-201ENST00000364207 107 ntBASIC1.83□□□□□ -2.12
LINC01560Q8TB33 SMIM11P1-201ENST00000369586 178 ntBASIC1.83□□□□□ -2.12
LINC01560Q8TB33 DEFA7P-201ENST00000382676 285 ntBASIC1.83□□□□□ -2.12
LINC01560Q8TB33 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
LINC01560Q8TB33 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.83□□□□□ -2.12
LINC01560Q8TB33 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.83□□□□□ -2.12
LINC01560Q8TB33 RNU2-62P-201ENST00000410868 191 ntBASIC1.83□□□□□ -2.12
LINC01560Q8TB33 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.83□□□□□ -2.12
LINC01560Q8TB33 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.83□□□□□ -2.12
LINC01560Q8TB33 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.83□□□□□ -2.12
LINC01560Q8TB33 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
LINC01560Q8TB33 RAC1P6-201ENST00000423911 575 ntBASIC1.83□□□□□ -2.12
LINC01560Q8TB33 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.83□□□□□ -2.12
LINC01560Q8TB33 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.83□□□□□ -2.12
LINC01560Q8TB33 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.83□□□□□ -2.12
LINC01560Q8TB33 AL590365.1-201ENST00000450788 243 ntBASIC1.83□□□□□ -2.12
LINC01560Q8TB33 SSXP1-201ENST00000453640 473 ntBASIC1.83□□□□□ -2.12
LINC01560Q8TB33 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.83□□□□□ -2.12
LINC01560Q8TB33 AC005178.1-201ENST00000508392 440 ntBASIC1.83□□□□□ -2.12
LINC01560Q8TB33 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.83□□□□□ -2.12
LINC01560Q8TB33 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.83□□□□□ -2.12
LINC01560Q8TB33 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.83□□□□□ -2.12
LINC01560Q8TB33 RNU6-991P-201ENST00000516168 107 ntBASIC1.83□□□□□ -2.12
LINC01560Q8TB33 SNORA31.15-201ENST00000516771 132 ntBASIC1.83□□□□□ -2.12
LINC01560Q8TB33 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
LINC01560Q8TB33 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
LINC01560Q8TB33 AC008015.1-201ENST00000555505 465 ntBASIC1.83□□□□□ -2.12
LINC01560Q8TB33 AC090616.2-202ENST00000584248 222 ntBASIC1.83□□□□□ -2.12
LINC01560Q8TB33 WISP1-OT1-201ENST00000602893 642 ntBASIC1.83□□□□□ -2.12
LINC01560Q8TB33 AC121334.2-201ENST00000605387 271 ntBASIC1.83□□□□□ -2.12
LINC01560Q8TB33 AC018638.7-201ENST00000605836 1114 ntBASIC1.83□□□□□ -2.12
LINC01560Q8TB33 AC027807.2-201ENST00000616099 408 ntBASIC1.83□□□□□ -2.12
LINC01560Q8TB33 AL589994.2-201ENST00000621124 579 ntBASIC1.83□□□□□ -2.12
LINC01560Q8TB33 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.83□□□□□ -2.12
LINC01560Q8TB33 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.83□□□□□ -2.12
LINC01560Q8TB33 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
LINC01560Q8TB33 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
LINC01560Q8TB33 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.83□□□□□ -2.12
LINC01560Q8TB33 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
LINC01560Q8TB33 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
LINC01560Q8TB33 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
LINC01560Q8TB33 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
LINC01560Q8TB33 ZNF72P-201ENST00000425869 1908 ntBASIC1.82□□□□□ -2.12
LINC01560Q8TB33 RNU6-1159P-201ENST00000362933 107 ntBASIC1.82□□□□□ -2.12
LINC01560Q8TB33 RNU5E-6P-201ENST00000365574 115 ntBASIC1.82□□□□□ -2.12
LINC01560Q8TB33 FCF1P10-201ENST00000407590 479 ntBASIC1.82□□□□□ -2.12
LINC01560Q8TB33 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.82□□□□□ -2.12
LINC01560Q8TB33 Y_RNA.608-201ENST00000410647 95 ntBASIC1.82□□□□□ -2.12
LINC01560Q8TB33 RNU6-1328P-201ENST00000410938 106 ntBASIC1.82□□□□□ -2.12
LINC01560Q8TB33 RPL26P27-201ENST00000414397 437 ntBASIC1.82□□□□□ -2.12
LINC01560Q8TB33 AC005005.2-201ENST00000420779 380 ntBASIC1.82□□□□□ -2.12
LINC01560Q8TB33 AL353729.1-201ENST00000425044 720 ntBASIC1.82□□□□□ -2.12
LINC01560Q8TB33 AL592045.1-201ENST00000429867 352 ntBASIC1.82□□□□□ -2.12
LINC01560Q8TB33 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.82□□□□□ -2.12
LINC01560Q8TB33 MED14P1-201ENST00000430517 648 ntBASIC1.82□□□□□ -2.12
LINC01560Q8TB33 HMGB1P27-201ENST00000431429 603 ntBASIC1.82□□□□□ -2.12
LINC01560Q8TB33 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.82□□□□□ -2.12
LINC01560Q8TB33 CR769767.1-201ENST00000436337 346 ntBASIC1.82□□□□□ -2.12
LINC01560Q8TB33 AC098831.1-201ENST00000440661 216 ntBASIC1.82□□□□□ -2.12
LINC01560Q8TB33 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.82□□□□□ -2.12
LINC01560Q8TB33 AC233279.1-201ENST00000455300 423 ntBASIC1.82□□□□□ -2.12
LINC01560Q8TB33 AC073901.1-201ENST00000462471 408 ntBASIC1.82□□□□□ -2.12
LINC01560Q8TB33 AC004263.1-201ENST00000479327 332 ntBASIC1.82□□□□□ -2.12
LINC01560Q8TB33 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.82□□□□□ -2.12
LINC01560Q8TB33 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.82□□□□□ -2.12
LINC01560Q8TB33 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.82□□□□□ -2.12
LINC01560Q8TB33 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.82□□□□□ -2.12
LINC01560Q8TB33 RNU6-759P-201ENST00000516740 103 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms