Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SVIPQ8NHG7 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC2.59□□□□□ -1.99
SVIPQ8NHG7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.59□□□□□ -2
SVIPQ8NHG7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -2
SVIPQ8NHG7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC2.58□□□□□ -2
SVIPQ8NHG7 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SVIPQ8NHG7 PCNP-204ENST00000469941 2028 ntTSL 1 (best) BASIC2.58□□□□□ -2
SVIPQ8NHG7 LUADT1-201ENST00000359838 453 ntTSL 5 BASIC2.58□□□□□ -2
SVIPQ8NHG7 RNU1-62P-201ENST00000362599 164 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 RNU6-1164P-201ENST00000364428 107 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 RNU1-51P-201ENST00000365345 176 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 MT-TD-201ENST00000387419 68 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 RNA5SP210-201ENST00000391034 120 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 U3.32-201ENST00000408116 212 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 RNA5SP113-201ENST00000410486 84 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC2.58□□□□□ -2
SVIPQ8NHG7 AL359092.1-201ENST00000417156 265 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
SVIPQ8NHG7 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC2.58□□□□□ -2
SVIPQ8NHG7 BX510359.4-201ENST00000423750 193 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 AC139712.2-201ENST00000424302 339 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC2.58□□□□□ -2
SVIPQ8NHG7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.58□□□□□ -2
SVIPQ8NHG7 AL357552.1-201ENST00000445254 415 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 UBE2V1P7-201ENST00000446395 340 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC2.58□□□□□ -2
SVIPQ8NHG7 RPL30P15-201ENST00000457129 321 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 RNU7-87P-201ENST00000459343 62 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC2.58□□□□□ -2
SVIPQ8NHG7 RN7SL177P-201ENST00000476596 299 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC2.58□□□□□ -2
SVIPQ8NHG7 TMEM92-202ENST00000507382 573 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SVIPQ8NHG7 AC107222.1-201ENST00000510899 637 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 RNU2-34P-201ENST00000516534 121 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 AC012339.2-201ENST00000523996 453 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 AC087441.2-201ENST00000529141 262 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 AP000889.1-201ENST00000530968 660 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.58□□□□□ -2
SVIPQ8NHG7 FRG2DP-202ENST00000566967 323 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 AC136624.4-201ENST00000573044 370 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.58□□□□□ -2
SVIPQ8NHG7 AC024619.3-201ENST00000582196 323 ntTSL 2 BASIC2.58□□□□□ -2
SVIPQ8NHG7 AC010618.3-203ENST00000595116 313 ntTSL 3 BASIC2.58□□□□□ -2
SVIPQ8NHG7 AP005432.2-201ENST00000608162 586 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 AL591926.8-201ENST00000616876 211 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 MIAT_exon1.1-201ENST00000617016 135 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 Metazoa_SRP.205-201ENST00000620071 267 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 U1.36-201ENST00000620684 176 ntBASIC2.58□□□□□ -2
SVIPQ8NHG7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SVIPQ8NHG7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
SVIPQ8NHG7 AC009487.2-201ENST00000420969 6821 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 RNU1-14P-201ENST00000362759 152 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 RNU6-873P-201ENST00000363833 107 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 RNA5SP387-201ENST00000364226 106 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 RNU6-1305P-201ENST00000364353 104 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SVIPQ8NHG7 MIR17-201ENST00000385012 84 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC2.57□□□□□ -2
SVIPQ8NHG7 WARS2P1-201ENST00000429678 537 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 AC092423.1-201ENST00000430165 186 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 MTND3P23-201ENST00000431980 347 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 AC236972.2-201ENST00000434979 310 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 LINC01682-201ENST00000435973 385 ntTSL 2 BASIC2.57□□□□□ -2
SVIPQ8NHG7 MTATP6P23-201ENST00000440153 476 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 AC009237.4-201ENST00000441078 238 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.57□□□□□ -2
SVIPQ8NHG7 GAPDHP53-201ENST00000458397 924 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 AP000870.1-201ENST00000472927 406 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 LINC02004-201ENST00000482019 294 ntTSL 2 BASIC2.57□□□□□ -2
SVIPQ8NHG7 RN7SL201P-201ENST00000482306 296 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC2.57□□□□□ -2
SVIPQ8NHG7 FGF7P4-201ENST00000509595 295 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.57□□□□□ -2
SVIPQ8NHG7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.57□□□□□ -2
SVIPQ8NHG7 RNU6-1114P-201ENST00000516022 107 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 RNU6-948P-201ENST00000516374 107 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 SCARNA21.2-201ENST00000516600 166 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 RNA5SP444-201ENST00000516844 106 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 RNU6-1213P-201ENST00000517075 94 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 AC091144.1-201ENST00000519573 138 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 SNX18P27-201ENST00000523611 779 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 NEU3-205ENST00000531619 582 ntTSL 5 BASIC2.57□□□□□ -2
SVIPQ8NHG7 AC027544.3-201ENST00000535082 757 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 APOOP3-201ENST00000536787 586 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 AC004486.1-201ENST00000546846 233 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 AC079905.1-201ENST00000549280 475 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.57□□□□□ -2
SVIPQ8NHG7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC2.57□□□□□ -2
SVIPQ8NHG7 AC004584.2-201ENST00000570407 410 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 MIR5004-201ENST00000579078 107 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 AC011921.2-201ENST00000589465 152 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 uc_338.25-201ENST00000613756 156 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 Y_RNA.804-201ENST00000615262 101 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 SDR42E1P4-201ENST00000620894 481 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 AL078596.1-201ENST00000624856 447 ntBASIC2.57□□□□□ -2
SVIPQ8NHG7 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SVIPQ8NHG7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SVIPQ8NHG7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.56□□□□□ -2
SVIPQ8NHG7 Y_RNA.106-201ENST00000363189 100 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms