Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL161713.1-201ENST00000555538 145 ntBASIC3.72□□□□□ -1.81
SLC44A3Q8N4M1 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.72□□□□□ -1.81
SLC44A3Q8N4M1 MIR4513-201ENST00000581077 86 ntBASIC3.72□□□□□ -1.81
SLC44A3Q8N4M1 AL138889.2-201ENST00000603883 242 ntBASIC3.72□□□□□ -1.81
SLC44A3Q8N4M1 MIR7112-201ENST00000616126 65 ntBASIC3.72□□□□□ -1.81
SLC44A3Q8N4M1 AL713922.2-201ENST00000619384 716 ntBASIC3.72□□□□□ -1.81
SLC44A3Q8N4M1 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.72□□□□□ -1.81
SLC44A3Q8N4M1 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.72□□□□□ -1.81
SLC44A3Q8N4M1 MTND5P30-201ENST00000452896 1731 ntBASIC3.72□□□□□ -1.81
SLC44A3Q8N4M1 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.72□□□□□ -1.81
SLC44A3Q8N4M1 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SLC44A3Q8N4M1 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SLC44A3Q8N4M1 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SLC44A3Q8N4M1 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SLC44A3Q8N4M1 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.81
SLC44A3Q8N4M1 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
SLC44A3Q8N4M1 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.81
SLC44A3Q8N4M1 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 RNU6-562P-201ENST00000362731 107 ntBASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 SNORA70E-201ENST00000384492 135 ntBASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 AC092809.3-201ENST00000415453 231 ntBASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 SSXP9-201ENST00000417503 292 ntBASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 MCFD2P1-201ENST00000417812 300 ntBASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 PPP1R11P2-201ENST00000423543 382 ntBASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 AC011742.1-201ENST00000431448 434 ntBASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 AC090774.1-201ENST00000435925 246 ntBASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 MIR4644-201ENST00000579929 84 ntBASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 U2.17-201ENST00000611454 95 ntBASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 AL450472.3-201ENST00000615578 367 ntBASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 MIR6852-201ENST00000621699 66 ntBASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 AC007998.5-201ENST00000622938 237 ntBASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 AC093908.1-201ENST00000623125 8092 ntBASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
SLC44A3Q8N4M1 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 SNORA23-201ENST00000365128 182 ntBASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 AC117470.1-201ENST00000381974 330 ntBASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 RNU6-1032P-201ENST00000384100 107 ntBASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 RNU6-890P-201ENST00000384121 107 ntBASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 RNU6-393P-201ENST00000384475 107 ntBASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 SNORD17-201ENST00000390930 237 ntBASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 RNU6-985P-201ENST00000410182 104 ntBASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 AL137014.1-201ENST00000420490 1226 ntBASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 AL590632.1-201ENST00000424289 371 ntBASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 MTCYBP9-201ENST00000431021 303 ntBASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 AL590399.6-201ENST00000446396 307 ntBASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 AC097473.1-201ENST00000508142 408 ntBASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 AC116337.1-201ENST00000509680 687 ntBASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 AC026782.1-201ENST00000512952 449 ntBASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 MIR4503-201ENST00000582187 83 ntBASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 uc_338.32-201ENST00000615087 172 ntBASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 AC133104.2-201ENST00000615272 193 ntBASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SLC44A3Q8N4M1 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 UBE3AP2-201ENST00000429033 2259 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 SNORD3E-201ENST00000362899 217 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 Y_RNA.158-201ENST00000363651 101 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 Y_RNA.252-201ENST00000364556 101 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 RNU6-128P-201ENST00000383976 107 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 Y_RNA.463-201ENST00000384271 102 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 RNU6-196P-201ENST00000384315 107 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 AL391417.1-201ENST00000404100 426 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 AL583834.1-201ENST00000406943 343 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 MIR1250-201ENST00000408098 113 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 AC099677.1-201ENST00000420575 175 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 AC087650.1-201ENST00000431445 468 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 AL591704.1-201ENST00000432574 275 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 AC236972.1-201ENST00000433225 199 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 U3.44-201ENST00000458938 192 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms