Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SNRPEP9-201ENST00000436794 238 ntBASIC5.06□□□□□ -1.6
TRIM50Q86XT4 AC009237.8-201ENST00000445492 379 ntBASIC5.06□□□□□ -1.6
TRIM50Q86XT4 AL451050.1-201ENST00000450126 415 ntBASIC5.06□□□□□ -1.6
TRIM50Q86XT4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM50Q86XT4 RN7SL41P-201ENST00000476144 297 ntBASIC5.06□□□□□ -1.6
TRIM50Q86XT4 HMGB3P16-201ENST00000508037 287 ntBASIC5.06□□□□□ -1.6
TRIM50Q86XT4 SCARNA24.2-201ENST00000516968 130 ntBASIC5.06□□□□□ -1.6
TRIM50Q86XT4 RNU6-1073P-201ENST00000517182 106 ntBASIC5.06□□□□□ -1.6
TRIM50Q86XT4 MIR2355-201ENST00000517199 87 ntBASIC5.06□□□□□ -1.6
TRIM50Q86XT4 AC022868.1-201ENST00000517767 391 ntBASIC5.06□□□□□ -1.6
TRIM50Q86XT4 AC023824.2-201ENST00000566185 400 ntBASIC5.06□□□□□ -1.6
TRIM50Q86XT4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM50Q86XT4 MIR3138-201ENST00000585238 82 ntBASIC5.06□□□□□ -1.6
TRIM50Q86XT4 AC136601.2-201ENST00000604356 474 ntBASIC5.06□□□□□ -1.6
TRIM50Q86XT4 ARF4P1-201ENST00000605447 541 ntBASIC5.06□□□□□ -1.6
TRIM50Q86XT4 AC073657.2-201ENST00000605661 303 ntBASIC5.06□□□□□ -1.6
TRIM50Q86XT4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM50Q86XT4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM50Q86XT4 AC240442.1-201ENST00000616055 283 ntBASIC5.06□□□□□ -1.6
TRIM50Q86XT4 AC097372.5-201ENST00000623665 376 ntBASIC5.06□□□□□ -1.6
TRIM50Q86XT4 SCARNA4-202ENST00000625402 129 ntBASIC5.06□□□□□ -1.6
TRIM50Q86XT4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM50Q86XT4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM50Q86XT4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM50Q86XT4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM50Q86XT4 DDX18P3-201ENST00000404856 2007 ntBASIC5.06□□□□□ -1.6
TRIM50Q86XT4 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM50Q86XT4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM50Q86XT4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM50Q86XT4 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM50Q86XT4 AC007785.2-201ENST00000598627 1916 ntBASIC5.05□□□□□ -1.6
TRIM50Q86XT4 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM50Q86XT4 RNU6-1266P-201ENST00000362794 105 ntBASIC5.05□□□□□ -1.6
TRIM50Q86XT4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM50Q86XT4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM50Q86XT4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM50Q86XT4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM50Q86XT4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM50Q86XT4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM50Q86XT4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.05□□□□□ -1.6
TRIM50Q86XT4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM50Q86XT4 AC010265.1-201ENST00000513509 211 ntBASIC5.05□□□□□ -1.6
TRIM50Q86XT4 RNU4-71P-201ENST00000516258 113 ntBASIC5.05□□□□□ -1.6
TRIM50Q86XT4 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM50Q86XT4 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.05□□□□□ -1.6
TRIM50Q86XT4 AC090617.3-201ENST00000573670 475 ntBASIC5.05□□□□□ -1.6
TRIM50Q86XT4 MIR4782-201ENST00000577987 79 ntBASIC5.05□□□□□ -1.6
TRIM50Q86XT4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM50Q86XT4 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.05□□□□□ -1.6
TRIM50Q86XT4 MIR6716-201ENST00000613413 80 ntBASIC5.05□□□□□ -1.6
TRIM50Q86XT4 AC114781.5-201ENST00000615297 108 ntBASIC5.05□□□□□ -1.6
TRIM50Q86XT4 AC011476.5-201ENST00000615594 130 ntBASIC5.05□□□□□ -1.6
TRIM50Q86XT4 FTX_2.1-201ENST00000618816 94 ntBASIC5.05□□□□□ -1.6
TRIM50Q86XT4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM50Q86XT4 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM50Q86XT4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM50Q86XT4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TRIM50Q86XT4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM50Q86XT4 AC008568.2-201ENST00000623862 2313 ntBASIC5.05□□□□□ -1.6
TRIM50Q86XT4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM50Q86XT4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM50Q86XT4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM50Q86XT4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM50Q86XT4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TRIM50Q86XT4 RNU6-222P-201ENST00000362438 107 ntBASIC5.04□□□□□ -1.6
TRIM50Q86XT4 RNU6-527P-201ENST00000363425 104 ntBASIC5.04□□□□□ -1.6
TRIM50Q86XT4 Y_RNA.269-201ENST00000364685 89 ntBASIC5.04□□□□□ -1.6
TRIM50Q86XT4 Y_RNA.270-201ENST00000364693 104 ntBASIC5.04□□□□□ -1.6
TRIM50Q86XT4 RNU4-9P-201ENST00000364951 139 ntBASIC5.04□□□□□ -1.6
TRIM50Q86XT4 Y_RNA.541-201ENST00000384640 113 ntBASIC5.04□□□□□ -1.6
TRIM50Q86XT4 RPS29P17-201ENST00000430795 166 ntBASIC5.04□□□□□ -1.6
TRIM50Q86XT4 Z82210.1-201ENST00000440037 231 ntBASIC5.04□□□□□ -1.6
TRIM50Q86XT4 AC124916.1-201ENST00000444020 547 ntBASIC5.04□□□□□ -1.6
TRIM50Q86XT4 snoU13.30-201ENST00000458951 104 ntBASIC5.04□□□□□ -1.6
TRIM50Q86XT4 RPL23AP49-201ENST00000492925 468 ntBASIC5.04□□□□□ -1.6
TRIM50Q86XT4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM50Q86XT4 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM50Q86XT4 MRPS36P4-201ENST00000534436 298 ntBASIC5.04□□□□□ -1.6
TRIM50Q86XT4 AC015912.2-201ENST00000571053 181 ntBASIC5.04□□□□□ -1.6
TRIM50Q86XT4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM50Q86XT4 BX284668.6-201ENST00000606899 438 ntBASIC5.04□□□□□ -1.6
TRIM50Q86XT4 AC004792.1-201ENST00000614523 137 ntBASIC5.04□□□□□ -1.6
TRIM50Q86XT4 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.04□□□□□ -1.6
TRIM50Q86XT4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM50Q86XT4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM50Q86XT4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM50Q86XT4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
TRIM50Q86XT4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM50Q86XT4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM50Q86XT4 AC139713.2-215ENST00000641428 5037 ntBASIC5.03□□□□□ -1.6
TRIM50Q86XT4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
TRIM50Q86XT4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TRIM50Q86XT4 RNU6-105P-201ENST00000363909 104 ntBASIC5.03□□□□□ -1.6
TRIM50Q86XT4 RNU6-937P-201ENST00000384325 106 ntBASIC5.03□□□□□ -1.6
TRIM50Q86XT4 MIR325-201ENST00000385260 98 ntBASIC5.03□□□□□ -1.6
TRIM50Q86XT4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TRIM50Q86XT4 SNORD78.2-201ENST00000391076 69 ntBASIC5.03□□□□□ -1.6
TRIM50Q86XT4 AL358453.1-201ENST00000422522 250 ntBASIC5.03□□□□□ -1.6
TRIM50Q86XT4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM50Q86XT4 RN7SL98P-201ENST00000462271 300 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms