Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PRPF39Q86UA1 AC096644.4-201ENST00000563417 2912 ntBASIC2.94□□□□□ -1.94
PRPF39Q86UA1 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.93□□□□□ -1.94
PRPF39Q86UA1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PRPF39Q86UA1 Y_RNA.22-201ENST00000362492 102 ntBASIC2.93□□□□□ -1.94
PRPF39Q86UA1 SNORA9.2-201ENST00000365361 133 ntBASIC2.93□□□□□ -1.94
PRPF39Q86UA1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.93□□□□□ -1.94
PRPF39Q86UA1 MIR887-201ENST00000401258 79 ntBASIC2.93□□□□□ -1.94
PRPF39Q86UA1 PTGES3P4-201ENST00000426243 356 ntBASIC2.93□□□□□ -1.94
PRPF39Q86UA1 AC092427.1-202ENST00000430569 476 ntBASIC2.93□□□□□ -1.94
PRPF39Q86UA1 GPR143P-201ENST00000434155 205 ntBASIC2.93□□□□□ -1.94
PRPF39Q86UA1 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.93□□□□□ -1.94
PRPF39Q86UA1 AL135938.1-201ENST00000443141 297 ntBASIC2.93□□□□□ -1.94
PRPF39Q86UA1 AC079781.2-201ENST00000446424 169 ntBASIC2.93□□□□□ -1.94
PRPF39Q86UA1 AP000936.2-201ENST00000447151 681 ntBASIC2.93□□□□□ -1.94
PRPF39Q86UA1 AC003071.1-201ENST00000451219 789 ntBASIC2.93□□□□□ -1.94
PRPF39Q86UA1 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.93□□□□□ -1.94
PRPF39Q86UA1 AL590639.1-201ENST00000456484 337 ntBASIC2.93□□□□□ -1.94
PRPF39Q86UA1 RNU6-956P-201ENST00000458868 103 ntBASIC2.93□□□□□ -1.94
PRPF39Q86UA1 AC091826.1-201ENST00000514065 313 ntBASIC2.93□□□□□ -1.94
PRPF39Q86UA1 RNA5SP356-201ENST00000515972 94 ntBASIC2.93□□□□□ -1.94
PRPF39Q86UA1 RN7SKP40-201ENST00000517211 242 ntBASIC2.93□□□□□ -1.94
PRPF39Q86UA1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.93□□□□□ -1.94
PRPF39Q86UA1 RANP3-201ENST00000530970 276 ntBASIC2.93□□□□□ -1.94
PRPF39Q86UA1 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PRPF39Q86UA1 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.93□□□□□ -1.94
PRPF39Q86UA1 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
PRPF39Q86UA1 MIR3117-201ENST00000584034 78 ntBASIC2.93□□□□□ -1.94
PRPF39Q86UA1 AL391813.1-201ENST00000603098 260 ntBASIC2.93□□□□□ -1.94
PRPF39Q86UA1 AC022079.1-201ENST00000621546 602 ntBASIC2.93□□□□□ -1.94
PRPF39Q86UA1 AC025034.2-201ENST00000623264 286 ntBASIC2.93□□□□□ -1.94
PRPF39Q86UA1 U6.114-201ENST00000636407 96 ntBASIC2.93□□□□□ -1.94
PRPF39Q86UA1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
PRPF39Q86UA1 AC103710.2-202ENST00000641454 2853 ntBASIC2.93□□□□□ -1.94
PRPF39Q86UA1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PRPF39Q86UA1 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.92□□□□□ -1.94
PRPF39Q86UA1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PRPF39Q86UA1 RNU6-461P-201ENST00000364195 107 ntBASIC2.92□□□□□ -1.94
PRPF39Q86UA1 RNU6-898P-201ENST00000365627 104 ntBASIC2.92□□□□□ -1.94
PRPF39Q86UA1 MIR1302-8-201ENST00000408342 128 ntBASIC2.92□□□□□ -1.94
PRPF39Q86UA1 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PRPF39Q86UA1 OR51A5P-201ENST00000415429 942 ntBASIC2.92□□□□□ -1.94
PRPF39Q86UA1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.92□□□□□ -1.94
PRPF39Q86UA1 RPL7P10-201ENST00000417407 739 ntBASIC2.92□□□□□ -1.94
PRPF39Q86UA1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.92□□□□□ -1.94
PRPF39Q86UA1 AL160275.3-201ENST00000423876 471 ntBASIC2.92□□□□□ -1.94
PRPF39Q86UA1 KATNBL1P3-201ENST00000443475 909 ntBASIC2.92□□□□□ -1.94
PRPF39Q86UA1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.92□□□□□ -1.94
PRPF39Q86UA1 AC126389.1-201ENST00000477436 290 ntBASIC2.92□□□□□ -1.94
PRPF39Q86UA1 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.92□□□□□ -1.94
PRPF39Q86UA1 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.92□□□□□ -1.94
PRPF39Q86UA1 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.92□□□□□ -1.94
PRPF39Q86UA1 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.92□□□□□ -1.94
PRPF39Q86UA1 Y_RNA.688-201ENST00000516565 95 ntBASIC2.92□□□□□ -1.94
PRPF39Q86UA1 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.92□□□□□ -1.94
PRPF39Q86UA1 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.92□□□□□ -1.94
PRPF39Q86UA1 MTCYBP20-201ENST00000524239 1129 ntBASIC2.92□□□□□ -1.94
PRPF39Q86UA1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.92□□□□□ -1.94
PRPF39Q86UA1 AC090616.3-201ENST00000582184 217 ntBASIC2.92□□□□□ -1.94
PRPF39Q86UA1 DEFB131E-202ENST00000602581 683 ntBASIC2.92□□□□□ -1.94
PRPF39Q86UA1 AC006023.1-201ENST00000603944 259 ntBASIC2.92□□□□□ -1.94
PRPF39Q86UA1 AC135507.1-201ENST00000607214 561 ntBASIC2.92□□□□□ -1.94
PRPF39Q86UA1 AC090115.4-201ENST00000609970 188 ntBASIC2.92□□□□□ -1.94
PRPF39Q86UA1 AC072046.2-201ENST00000618366 268 ntBASIC2.92□□□□□ -1.94
PRPF39Q86UA1 CU459211.1-201ENST00000635667 749 ntBASIC2.92□□□□□ -1.94
PRPF39Q86UA1 LRRC77P-213ENST00000637727 880 ntBASIC2.92□□□□□ -1.94
PRPF39Q86UA1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
PRPF39Q86UA1 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
PRPF39Q86UA1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PRPF39Q86UA1 CKAP2P1-201ENST00000555477 2049 ntBASIC2.92□□□□□ -1.94
PRPF39Q86UA1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.91□□□□□ -1.94
PRPF39Q86UA1 SNORA40C-201ENST00000391285 128 ntBASIC2.91□□□□□ -1.94
PRPF39Q86UA1 RNU6-248P-201ENST00000410720 107 ntBASIC2.91□□□□□ -1.94
PRPF39Q86UA1 BX682237.1-201ENST00000415016 335 ntBASIC2.91□□□□□ -1.94
PRPF39Q86UA1 AL353706.1-201ENST00000436728 494 ntBASIC2.91□□□□□ -1.94
PRPF39Q86UA1 AC105272.1-201ENST00000438604 198 ntBASIC2.91□□□□□ -1.94
PRPF39Q86UA1 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.91□□□□□ -1.94
PRPF39Q86UA1 GSTA11P-201ENST00000452866 669 ntBASIC2.91□□□□□ -1.94
PRPF39Q86UA1 AC107626.1-201ENST00000471084 183 ntBASIC2.91□□□□□ -1.94
PRPF39Q86UA1 RPL23AP11-201ENST00000475260 469 ntBASIC2.91□□□□□ -1.94
PRPF39Q86UA1 AC023194.1-201ENST00000493084 308 ntBASIC2.91□□□□□ -1.94
PRPF39Q86UA1 RPL23AP94-201ENST00000512518 302 ntBASIC2.91□□□□□ -1.94
PRPF39Q86UA1 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.91□□□□□ -1.94
PRPF39Q86UA1 AC090572.1-201ENST00000519251 160 ntBASIC2.91□□□□□ -1.94
PRPF39Q86UA1 BTF3P12-201ENST00000519620 469 ntBASIC2.91□□□□□ -1.94
PRPF39Q86UA1 AP001646.1-201ENST00000527936 915 ntBASIC2.91□□□□□ -1.94
PRPF39Q86UA1 AC007536.1-201ENST00000533382 349 ntBASIC2.91□□□□□ -1.94
PRPF39Q86UA1 CYCSP39-201ENST00000565821 309 ntBASIC2.91□□□□□ -1.94
PRPF39Q86UA1 AC078899.3-201ENST00000599065 212 ntBASIC2.91□□□□□ -1.94
PRPF39Q86UA1 RPL12P50-201ENST00000603116 116 ntBASIC2.91□□□□□ -1.94
PRPF39Q86UA1 AC091152.3-201ENST00000604227 325 ntBASIC2.91□□□□□ -1.94
PRPF39Q86UA1 Z84480.1-201ENST00000605131 311 ntBASIC2.91□□□□□ -1.94
PRPF39Q86UA1 AL589743.7-201ENST00000612637 233 ntBASIC2.91□□□□□ -1.94
PRPF39Q86UA1 U6.42-201ENST00000618440 107 ntBASIC2.91□□□□□ -1.94
PRPF39Q86UA1 AC138649.3-201ENST00000622154 254 ntBASIC2.91□□□□□ -1.94
PRPF39Q86UA1 AC005858.4-201ENST00000623191 700 ntBASIC2.91□□□□□ -1.94
PRPF39Q86UA1 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PRPF39Q86UA1 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.91□□□□□ -1.94
PRPF39Q86UA1 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PRPF39Q86UA1 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms