Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 AL513331.1-201ENST00000411908 397 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 VN1R36P-201ENST00000414936 291 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 BX842559.1-201ENST00000419615 532 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 RPL27AP8-201ENST00000424277 446 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 AC091390.3-201ENST00000426478 338 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 SAR1AP4-201ENST00000429225 591 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 AL591704.1-201ENST00000432574 275 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 RNU7-167P-201ENST00000459160 62 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 SNORD19B-201ENST00000459623 84 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 TRBV1-201ENST00000476502 284 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 AC012181.1-201ENST00000479895 423 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 SCARNA15.1-201ENST00000516384 125 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 SNORA74D-201ENST00000516404 141 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 RNU6-914P-201ENST00000516749 109 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 AP005597.4-201ENST00000526762 229 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 AP001330.4-201ENST00000604350 154 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 APOOP1-201ENST00000604695 592 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 U2.17-201ENST00000611454 95 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 AC034102.8-201ENST00000615146 484 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 FAM157A-202ENST00000615155 405 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 AL359757.2-201ENST00000624309 274 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 SDAD1P2-201ENST00000441308 2028 ntBASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
C9orf139Q6ZV77 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 DEFB108F-201ENST00000344638 222 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 RNU6-525P-201ENST00000363685 104 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 RNU6-371P-201ENST00000364283 108 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 RNU6-434P-201ENST00000384376 107 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 SNORD116-29-201ENST00000384516 83 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 MIR490-201ENST00000384865 128 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 RPS4XP7-201ENST00000406274 780 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 MIR548F5-201ENST00000408421 86 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 RN7SKP53-201ENST00000411337 315 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 AC080125.1-201ENST00000414888 684 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 AF228730.4-201ENST00000421457 183 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 RPL21P109-201ENST00000422213 475 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 HMGB1P27-201ENST00000431429 603 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 SNRPEP4-201ENST00000435815 279 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 MTCYBP6-201ENST00000441810 138 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 TXNP1-201ENST00000441872 371 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 RNU7-170P-201ENST00000459303 61 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 AC008155.2-201ENST00000464337 397 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 AC087884.1-201ENST00000469738 328 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 RPL7P5-201ENST00000471472 736 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 AC117503.1-201ENST00000472241 394 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 SNORA14.1-201ENST00000516113 141 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 RNA5SP471-201ENST00000516971 106 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 SNORA25.17-201ENST00000517184 124 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 RNA5SP454-201ENST00000517231 127 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 COPS8P3-201ENST00000526024 482 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 FRG2DP-202ENST00000566967 323 ntBASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.87□□□□□ -1.95
C9orf139Q6ZV77 MIR4474-201ENST00000579189 78 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms