Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 AL365496.1-201ENST00000426885 215 ntBASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 MTND5P15-201ENST00000434246 349 ntBASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 TPTE2P6-202ENST00000445572 1007 ntBASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 AC015908.1-201ENST00000478739 476 ntBASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 RNF138P1-201ENST00000502765 546 ntBASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 Y_RNA.700-201ENST00000516806 100 ntBASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 AC097372.4-201ENST00000625025 466 ntBASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 AL022578.1-201ENST00000439330 1433 ntBASIC0.49□□□□□ -2.33
CSPG4Q6UVK1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 RNU6-244P-201ENST00000391028 104 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 SFR1P2-201ENST00000421841 730 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 AL606489.2-201ENST00000433886 234 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 SNRPGP6-201ENST00000451124 220 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 UBE2Q2P9-201ENST00000490086 202 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 SNORA62.5-201ENST00000516634 120 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 MTND2P26-201ENST00000528255 1029 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 LINC00557-201ENST00000563184 1279 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 MIR4299-201ENST00000577899 72 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 MIR3609-201ENST00000582661 80 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 AL355802.3-201ENST00000607571 545 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 DUSP12P1-201ENST00000612874 516 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 AP003072.5-201ENST00000623872 773 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 AL136313.1-201ENST00000624804 202 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 AL049737.1-201ENST00000413920 1403 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 Y_RNA.170-201ENST00000363746 110 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 RNA5SP299-201ENST00000391203 116 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 MTATP6P31-201ENST00000406985 692 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 MTCO1P3-201ENST00000429327 192 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 MTND4LP3-201ENST00000468320 276 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 CBX3P3-201ENST00000508108 532 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 DUXAP1-201ENST00000556632 463 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 AL133241.1-201ENST00000556832 487 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 AL450336.1-201ENST00000605180 586 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 MIR6718-201ENST00000616153 80 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 AP003400.5-201ENST00000624827 617 ntBASIC0.48□□□□□ -2.33
CSPG4Q6UVK1 AC016716.1-201ENST00000265882 708 ntBASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 RNU6-1328P-201ENST00000410938 106 ntBASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 OFD1P18Y-201ENST00000420889 959 ntBASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 SNRPEP7-201ENST00000438350 220 ntBASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 AC093770.1-201ENST00000511559 571 ntBASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 AC008494.2-201ENST00000514544 370 ntBASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 SNORA70.16-201ENST00000516390 95 ntBASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 AP003355.1-201ENST00000518956 587 ntBASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 OR1M4P-201ENST00000589199 287 ntBASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 AC025588.4-201ENST00000615802 908 ntBASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 AP003485.1-201ENST00000625093 753 ntBASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 RNU6-43P-201ENST00000384302 107 ntBASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 AL022718.1-201ENST00000412004 84 ntBASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 MRPL35P3-201ENST00000421557 364 ntBASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 TRAPPC13P1-201ENST00000435991 1062 ntBASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 RPL31P53-201ENST00000457065 348 ntBASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 AC092757.1-201ENST00000467293 467 ntBASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 PTK2-220ENST00000520151 573 ntTSL 4 BASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 PRR13P7-201ENST00000605538 430 ntBASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CSPG4Q6UVK1 Y_RNA.324-201ENST00000365165 102 ntBASIC0.46□□□□□ -2.34
CSPG4Q6UVK1 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms