Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 AC112204.3-201ENST00000623822 332 ntBASIC1.68□□□□□ -2.14
SMARCD3Q6STE5 AC092192.1-201ENST00000633154 1018 ntBASIC1.68□□□□□ -2.14
SMARCD3Q6STE5 AC007671.2-201ENST00000637344 619 ntBASIC1.68□□□□□ -2.14
SMARCD3Q6STE5 AC099063.3-201ENST00000642066 185 ntBASIC1.68□□□□□ -2.14
SMARCD3Q6STE5 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 RNU6-1078P-201ENST00000364522 103 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 RNU6-359P-201ENST00000365466 108 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 CCNG1P1-201ENST00000406783 885 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 MTCO1P17-201ENST00000411522 491 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 AC093106.2-201ENST00000428212 385 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 HMGB1P9-201ENST00000429856 646 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 AC104563.1-201ENST00000476147 376 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 RN7SL429P-201ENST00000479090 223 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 RN7SL489P-201ENST00000486185 223 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 RN7SL327P-201ENST00000488659 223 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 RPL38P4-201ENST00000502376 214 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 AC093809.1-201ENST00000509155 340 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 SNORA31.25-201ENST00000517242 134 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 ELOCP32-201ENST00000548625 324 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 AC136618.2-201ENST00000575091 400 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 AC090897.2-201ENST00000581715 130 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 AC060771.1-201ENST00000582031 164 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 AC078899.2-201ENST00000595282 212 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 BNIP3P23-201ENST00000599655 511 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 AC021171.1-201ENST00000603137 706 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 RNU6-88P-201ENST00000606801 100 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 RN7SL853P-201ENST00000617250 223 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 AL031667.3-201ENST00000620124 655 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 AC092447.10-201ENST00000620607 1652 ntBASIC1.67□□□□□ -2.14
SMARCD3Q6STE5 RNA5SP276-201ENST00000362580 94 ntBASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 RNU6-1083P-201ENST00000384022 107 ntBASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 RNU6-253P-201ENST00000384730 105 ntBASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 AL109755.1-201ENST00000401791 649 ntBASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 AC098592.1-201ENST00000419352 333 ntBASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 AC007182.2-201ENST00000489251 402 ntBASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 AC098591.2-201ENST00000510152 315 ntBASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 AP003461.1-201ENST00000528866 78 ntBASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 AC007375.1-201ENST00000554513 578 ntBASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 MIR3122-201ENST00000577243 73 ntBASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 MIR4419B-201ENST00000577260 68 ntBASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 AC068790.3-201ENST00000602988 553 ntBASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 AL357094.1-201ENST00000603845 844 ntBASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 AL161729.4-201ENST00000604650 476 ntBASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 BCRP9-201ENST00000605312 388 ntBASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 AC072039.2-201ENST00000608883 439 ntBASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 AL355816.2-201ENST00000610049 647 ntBASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 AC012150.2-201ENST00000621300 544 ntBASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 AC104454.1-201ENST00000421341 1401 ntBASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.66□□□□□ -2.14
SMARCD3Q6STE5 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
SMARCD3Q6STE5 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
SMARCD3Q6STE5 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 MTND5P33-201ENST00000571250 1450 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 Y_RNA.302-201ENST00000364997 102 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 RNU6-741P-201ENST00000383889 107 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 RNU6-637P-201ENST00000384050 107 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 RNU6-769P-201ENST00000384407 104 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 RNU1-148P-201ENST00000384472 162 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 RNU6-140P-201ENST00000384566 108 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 RNU6-750P-201ENST00000390946 107 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 AL590084.2-201ENST00000401481 382 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 RN7SKP266-201ENST00000410232 287 ntBASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.65□□□□□ -2.15
SMARCD3Q6STE5 AL445685.2-201ENST00000422551 342 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms