Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 AC025755.1-201ENST00000521306 278 ntBASIC3.12□□□□□ -1.91
SNX30Q5VWJ9 OR5AL2P-201ENST00000532185 920 ntBASIC3.12□□□□□ -1.91
SNX30Q5VWJ9 AC106782.4-201ENST00000568264 210 ntBASIC3.12□□□□□ -1.91
SNX30Q5VWJ9 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.12□□□□□ -1.91
SNX30Q5VWJ9 AC020895.1-201ENST00000595362 272 ntBASIC3.12□□□□□ -1.91
SNX30Q5VWJ9 NDUFA8P1-201ENST00000605525 367 ntBASIC3.12□□□□□ -1.91
SNX30Q5VWJ9 AP001486.3-201ENST00000615334 372 ntBASIC3.12□□□□□ -1.91
SNX30Q5VWJ9 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.12□□□□□ -1.91
SNX30Q5VWJ9 AC007318.2-201ENST00000620999 243 ntBASIC3.12□□□□□ -1.91
SNX30Q5VWJ9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SNX30Q5VWJ9 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.12□□□□□ -1.91
SNX30Q5VWJ9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SNX30Q5VWJ9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 AC108206.1-201ENST00000570186 4159 ntBASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 RNU4-24P-201ENST00000364565 139 ntBASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 RNU4-48P-201ENST00000365559 182 ntBASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 MIR634-201ENST00000385208 97 ntBASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 UBE2V1P2-201ENST00000397758 440 ntBASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 GSTA9P-201ENST00000406231 611 ntBASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 EEF1A1P41-201ENST00000414667 207 ntBASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 AC009414.1-201ENST00000427200 443 ntBASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 MTCO2P11-201ENST00000431069 680 ntBASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 AL078601.1-201ENST00000444542 271 ntBASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 WASF1P1-201ENST00000447560 1131 ntBASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 AP003392.2-201ENST00000527269 208 ntBASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 AC107016.2-201ENST00000547968 190 ntBASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 MTCYBP33-201ENST00000575007 1130 ntBASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 AC008521.1-201ENST00000587471 187 ntBASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 AC091805.2-201ENST00000603848 235 ntBASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 AL138889.2-201ENST00000603883 242 ntBASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 AC007938.3-201ENST00000604965 623 ntBASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 AL033523.1-201ENST00000605153 153 ntBASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 AC104073.3-201ENST00000610942 955 ntBASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.11□□□□□ -1.91
SNX30Q5VWJ9 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 SNORD21-201ENST00000383953 95 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 RNU6-606P-201ENST00000384721 111 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 MIR1-2-201ENST00000384961 85 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 RNU2-49P-201ENST00000410666 184 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 RNU2-16P-201ENST00000410712 136 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 AC023141.4-201ENST00000412031 328 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 COTL1P1-201ENST00000422309 375 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 MTCYBP5-201ENST00000423752 1135 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 AC007560.1-201ENST00000426912 237 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 HMGN2P10-201ENST00000448085 265 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 RPS29P26-201ENST00000477483 171 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 AL049873.1-201ENST00000480540 376 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 AP004217.1-201ENST00000480579 346 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 HMGB1P29-201ENST00000505659 499 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 AC104806.1-201ENST00000508720 308 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 RNA5SP76-201ENST00000516277 87 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 SCARNA13-201ENST00000516672 275 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 RNA5SP503-201ENST00000517047 117 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 RNU6-1183P-201ENST00000517054 60 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 SNORA31.19-201ENST00000517079 126 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 RNU6-685P-201ENST00000517088 95 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 AC009902.1-201ENST00000519351 183 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 AC021739.1-201ENST00000559631 174 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 MIR548AC-201ENST00000585049 88 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 AC004223.2-201ENST00000590309 544 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 AL137843.1-201ENST00000605078 385 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 AL670379.4-201ENST00000605279 254 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 U6.42-201ENST00000618440 107 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 AC073534.2-201ENST00000620377 381 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 AC002064.3-201ENST00000623448 346 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 AC138915.1-201ENST00000565427 1685 ntBASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.1□□□□□ -1.91
SNX30Q5VWJ9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 MIR412-201ENST00000362142 91 ntBASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 RNU6-1287P-201ENST00000362914 107 ntBASIC3.09□□□□□ -1.91
SNX30Q5VWJ9 RNU6-1120P-201ENST00000362988 108 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms