Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RC3H1Q5TC82 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
RC3H1Q5TC82 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RC3H1Q5TC82 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RC3H1Q5TC82 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RC3H1Q5TC82 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RC3H1Q5TC82 MIR670-201ENST00000390142 98 ntBASIC5.57□□□□□ -1.52
RC3H1Q5TC82 RNU4-30P-201ENST00000410245 143 ntBASIC5.57□□□□□ -1.52
RC3H1Q5TC82 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.57□□□□□ -1.52
RC3H1Q5TC82 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.57□□□□□ -1.52
RC3H1Q5TC82 AC092447.6-201ENST00000414578 210 ntBASIC5.57□□□□□ -1.52
RC3H1Q5TC82 AC099336.2-201ENST00000422457 254 ntBASIC5.57□□□□□ -1.52
RC3H1Q5TC82 RPS26P47-201ENST00000427219 348 ntBASIC5.57□□□□□ -1.52
RC3H1Q5TC82 TOMM20P4-201ENST00000427861 435 ntBASIC5.57□□□□□ -1.52
RC3H1Q5TC82 AL358232.1-201ENST00000448030 501 ntBASIC5.57□□□□□ -1.52
RC3H1Q5TC82 AL162151.2-201ENST00000448875 158 ntBASIC5.57□□□□□ -1.52
RC3H1Q5TC82 AC099560.2-201ENST00000457554 255 ntBASIC5.57□□□□□ -1.52
RC3H1Q5TC82 AC091959.1-201ENST00000495857 238 ntBASIC5.57□□□□□ -1.52
RC3H1Q5TC82 AL592156.1-201ENST00000508758 304 ntBASIC5.57□□□□□ -1.52
RC3H1Q5TC82 RNA5SP143-201ENST00000516936 115 ntBASIC5.57□□□□□ -1.52
RC3H1Q5TC82 AP005660.1-201ENST00000522972 293 ntBASIC5.57□□□□□ -1.52
RC3H1Q5TC82 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.57□□□□□ -1.52
RC3H1Q5TC82 IGHVIII-44-202ENST00000636235 289 ntBASIC5.57□□□□□ -1.52
RC3H1Q5TC82 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.57□□□□□ -1.52
RC3H1Q5TC82 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RC3H1Q5TC82 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RC3H1Q5TC82 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RC3H1Q5TC82 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.56□□□□□ -1.52
RC3H1Q5TC82 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RC3H1Q5TC82 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RC3H1Q5TC82 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RC3H1Q5TC82 AC139769.1-204ENST00000472297 1931 ntBASIC5.56□□□□□ -1.52
RC3H1Q5TC82 AL022322.2-201ENST00000624072 20397 ntBASIC5.56□□□□□ -1.52
RC3H1Q5TC82 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RC3H1Q5TC82 RNU1-14P-201ENST00000362759 152 ntBASIC5.56□□□□□ -1.52
RC3H1Q5TC82 RNA5SP130-201ENST00000364431 114 ntBASIC5.56□□□□□ -1.52
RC3H1Q5TC82 MIR186-201ENST00000384988 86 ntBASIC5.56□□□□□ -1.52
RC3H1Q5TC82 CYCSP19-201ENST00000411715 316 ntBASIC5.56□□□□□ -1.52
RC3H1Q5TC82 SNORD56-201ENST00000413522 71 ntBASIC5.56□□□□□ -1.52
RC3H1Q5TC82 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.56□□□□□ -1.52
RC3H1Q5TC82 RPS20P1-201ENST00000434853 354 ntBASIC5.56□□□□□ -1.52
RC3H1Q5TC82 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.56□□□□□ -1.52
RC3H1Q5TC82 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.56□□□□□ -1.52
RC3H1Q5TC82 AC022493.1-201ENST00000492984 337 ntBASIC5.56□□□□□ -1.52
RC3H1Q5TC82 RNA5SP73-201ENST00000516744 108 ntBASIC5.56□□□□□ -1.52
RC3H1Q5TC82 IGKV2D-36-201ENST00000518643 226 ntBASIC5.56□□□□□ -1.52
RC3H1Q5TC82 AC233702.2-202ENST00000562547 291 ntBASIC5.56□□□□□ -1.52
RC3H1Q5TC82 AC116447.1-201ENST00000613153 453 ntBASIC5.56□□□□□ -1.52
RC3H1Q5TC82 AL450472.3-201ENST00000615578 367 ntBASIC5.56□□□□□ -1.52
RC3H1Q5TC82 MIR6875-201ENST00000617506 72 ntBASIC5.56□□□□□ -1.52
RC3H1Q5TC82 OR4G2P-202ENST00000641004 1759 ntBASIC5.56□□□□□ -1.52
RC3H1Q5TC82 AL161912.2-201ENST00000565707 3007 ntBASIC5.56□□□□□ -1.52
RC3H1Q5TC82 AC104623.2-202ENST00000623477 4002 ntBASIC5.56□□□□□ -1.52
RC3H1Q5TC82 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RC3H1Q5TC82 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.56□□□□□ -1.52
RC3H1Q5TC82 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RC3H1Q5TC82 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.56□□□□□ -1.52
RC3H1Q5TC82 AC112198.2-201ENST00000426589 6996 ntBASIC5.56□□□□□ -1.52
RC3H1Q5TC82 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RC3H1Q5TC82 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RC3H1Q5TC82 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RC3H1Q5TC82 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RC3H1Q5TC82 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.55□□□□□ -1.52
RC3H1Q5TC82 PRO1804-201ENST00000623780 2050 ntBASIC5.55□□□□□ -1.52
RC3H1Q5TC82 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RC3H1Q5TC82 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RC3H1Q5TC82 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
RC3H1Q5TC82 ADAM5-202ENST00000399789 1942 ntBASIC5.55□□□□□ -1.52
RC3H1Q5TC82 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
RC3H1Q5TC82 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RC3H1Q5TC82 Y_RNA.127-201ENST00000363386 109 ntBASIC5.55□□□□□ -1.52
RC3H1Q5TC82 SNORA62.3-201ENST00000365110 153 ntBASIC5.55□□□□□ -1.52
RC3H1Q5TC82 MIR135A2-201ENST00000384854 100 ntBASIC5.55□□□□□ -1.52
RC3H1Q5TC82 ENSAP1-201ENST00000392855 326 ntBASIC5.55□□□□□ -1.52
RC3H1Q5TC82 RNU5A-5P-201ENST00000411054 116 ntBASIC5.55□□□□□ -1.52
RC3H1Q5TC82 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.55□□□□□ -1.52
RC3H1Q5TC82 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.55□□□□□ -1.52
RC3H1Q5TC82 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.55□□□□□ -1.52
RC3H1Q5TC82 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RC3H1Q5TC82 SNORD116-25-201ENST00000516517 92 ntBASIC5.55□□□□□ -1.52
RC3H1Q5TC82 RNU6-612P-201ENST00000516909 102 ntBASIC5.55□□□□□ -1.52
RC3H1Q5TC82 RNU1-45P-201ENST00000517191 141 ntBASIC5.55□□□□□ -1.52
RC3H1Q5TC82 TRAV37-201ENST00000553906 342 ntBASIC5.55□□□□□ -1.52
RC3H1Q5TC82 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.55□□□□□ -1.52
RC3H1Q5TC82 RN7SL703P-201ENST00000578485 302 ntBASIC5.55□□□□□ -1.52
RC3H1Q5TC82 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.55□□□□□ -1.52
RC3H1Q5TC82 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.55□□□□□ -1.52
RC3H1Q5TC82 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RC3H1Q5TC82 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RC3H1Q5TC82 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.55□□□□□ -1.52
RC3H1Q5TC82 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.55□□□□□ -1.52
RC3H1Q5TC82 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RC3H1Q5TC82 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RC3H1Q5TC82 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RC3H1Q5TC82 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
RC3H1Q5TC82 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.55□□□□□ -1.52
RC3H1Q5TC82 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
RC3H1Q5TC82 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.55□□□□□ -1.52
RC3H1Q5TC82 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RC3H1Q5TC82 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms