Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.25□□□□□ -2.37
UBR4Q5T4S7 Z96811.1-201ENST00000445880 108 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 CDC42P4-201ENST00000510507 563 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC0.25□□□□□ -2.37
UBR4Q5T4S7 AL713866.2-201ENST00000603579 219 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 RNU6-514P-201ENST00000384208 107 ntBASIC0.24□□□□□ -2.37
UBR4Q5T4S7 HSPE1P26-201ENST00000405341 275 ntBASIC0.24□□□□□ -2.37
UBR4Q5T4S7 RNU2-63P-201ENST00000410792 194 ntBASIC0.24□□□□□ -2.37
UBR4Q5T4S7 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
UBR4Q5T4S7 AC097463.2-201ENST00000421074 142 ntBASIC0.24□□□□□ -2.37
UBR4Q5T4S7 AL157398.1-201ENST00000452981 186 ntBASIC0.24□□□□□ -2.37
UBR4Q5T4S7 RNU6-1037P-201ENST00000459571 107 ntBASIC0.24□□□□□ -2.37
UBR4Q5T4S7 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
UBR4Q5T4S7 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.24□□□□□ -2.37
UBR4Q5T4S7 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.24□□□□□ -2.37
UBR4Q5T4S7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.24□□□□□ -2.37
UBR4Q5T4S7 RPS26P56-201ENST00000444468 240 ntBASIC0.24□□□□□ -2.37
UBR4Q5T4S7 HMGB3P3-201ENST00000510526 400 ntBASIC0.24□□□□□ -2.37
UBR4Q5T4S7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.24□□□□□ -2.37
UBR4Q5T4S7 MTCO1P47-201ENST00000523889 1271 ntBASIC0.24□□□□□ -2.37
UBR4Q5T4S7 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC0.24□□□□□ -2.37
UBR4Q5T4S7 AC009518.2-201ENST00000418056 731 ntBASIC0.24□□□□□ -2.37
UBR4Q5T4S7 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.24□□□□□ -2.37
UBR4Q5T4S7 RPS15AP10-201ENST00000432472 382 ntBASIC0.24□□□□□ -2.37
UBR4Q5T4S7 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC0.24□□□□□ -2.37
UBR4Q5T4S7 RPEP5-201ENST00000441137 268 ntBASIC0.24□□□□□ -2.37
UBR4Q5T4S7 MTND4P19-201ENST00000446659 478 ntBASIC0.24□□□□□ -2.37
UBR4Q5T4S7 AC103851.1-201ENST00000506833 274 ntBASIC0.24□□□□□ -2.37
UBR4Q5T4S7 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.24□□□□□ -2.37
UBR4Q5T4S7 AL160236.1-201ENST00000556317 195 ntBASIC0.24□□□□□ -2.37
UBR4Q5T4S7 AC090425.2-201ENST00000608818 501 ntBASIC0.24□□□□□ -2.37
UBR4Q5T4S7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
UBR4Q5T4S7 MTND2P16-201ENST00000419987 799 ntBASIC0.24□□□□□ -2.37
UBR4Q5T4S7 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC0.24□□□□□ -2.37
UBR4Q5T4S7 UBE2V2P3-201ENST00000433562 437 ntBASIC0.24□□□□□ -2.37
UBR4Q5T4S7 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.24□□□□□ -2.37
UBR4Q5T4S7 VPS26AP1-201ENST00000483197 979 ntBASIC0.24□□□□□ -2.37
UBR4Q5T4S7 RPF2P2-201ENST00000504693 896 ntBASIC0.24□□□□□ -2.37
UBR4Q5T4S7 AL158211.1-201ENST00000566763 763 ntBASIC0.24□□□□□ -2.37
UBR4Q5T4S7 AC007363.1-201ENST00000604736 620 ntBASIC0.24□□□□□ -2.37
UBR4Q5T4S7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC0.24□□□□□ -2.37
UBR4Q5T4S7 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.23□□□□□ -2.37
UBR4Q5T4S7 AP006587.4-201ENST00000526053 529 ntBASIC0.23□□□□□ -2.37
UBR4Q5T4S7 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC0.23□□□□□ -2.37
UBR4Q5T4S7 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.23□□□□□ -2.37
UBR4Q5T4S7 MIR4474-201ENST00000579189 78 ntBASIC0.23□□□□□ -2.37
UBR4Q5T4S7 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.23□□□□□ -2.37
UBR4Q5T4S7 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC0.23□□□□□ -2.37
UBR4Q5T4S7 AC087884.1-201ENST00000469738 328 ntBASIC0.23□□□□□ -2.37
UBR4Q5T4S7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.23□□□□□ -2.37
UBR4Q5T4S7 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.23□□□□□ -2.37
UBR4Q5T4S7 AC090888.1-201ENST00000561335 1141 ntBASIC0.23□□□□□ -2.37
UBR4Q5T4S7 AC123767.1-202ENST00000620407 817 ntBASIC0.23□□□□□ -2.37
UBR4Q5T4S7 AL121890.5-201ENST00000620848 304 ntBASIC0.23□□□□□ -2.37
UBR4Q5T4S7 RNA5SP361-201ENST00000362686 118 ntBASIC0.23□□□□□ -2.37
UBR4Q5T4S7 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.23□□□□□ -2.37
UBR4Q5T4S7 AC010285.1-201ENST00000470580 392 ntBASIC0.23□□□□□ -2.37
UBR4Q5T4S7 MTCO1P30-201ENST00000515244 580 ntBASIC0.23□□□□□ -2.37
UBR4Q5T4S7 SNORD116-26-201ENST00000516006 96 ntBASIC0.23□□□□□ -2.37
UBR4Q5T4S7 AC022662.1-201ENST00000580252 331 ntBASIC0.23□□□□□ -2.37
UBR4Q5T4S7 AL590229.1-201ENST00000603497 542 ntBASIC0.23□□□□□ -2.37
UBR4Q5T4S7 AC040896.1-201ENST00000613819 479 ntBASIC0.23□□□□□ -2.37
UBR4Q5T4S7 Y_RNA.505-201ENST00000384489 102 ntBASIC0.23□□□□□ -2.37
UBR4Q5T4S7 UBBP3-201ENST00000445497 241 ntBASIC0.23□□□□□ -2.37
UBR4Q5T4S7 ARPC3P2-201ENST00000457786 533 ntBASIC0.23□□□□□ -2.37
UBR4Q5T4S7 AC027575.1-201ENST00000481064 460 ntBASIC0.23□□□□□ -2.37
UBR4Q5T4S7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC0.23□□□□□ -2.37
UBR4Q5T4S7 AC006518.2-201ENST00000542513 940 ntBASIC0.23□□□□□ -2.37
UBR4Q5T4S7 MIR3115-201ENST00000577915 68 ntBASIC0.23□□□□□ -2.37
UBR4Q5T4S7 AC008945.2-201ENST00000606056 604 ntBASIC0.23□□□□□ -2.37
UBR4Q5T4S7 AC092447.6-201ENST00000414578 210 ntBASIC0.22□□□□□ -2.37
UBR4Q5T4S7 BX682237.1-201ENST00000415016 335 ntBASIC0.22□□□□□ -2.37
UBR4Q5T4S7 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.22□□□□□ -2.37
UBR4Q5T4S7 AC092754.2-201ENST00000463506 460 ntBASIC0.22□□□□□ -2.37
UBR4Q5T4S7 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.22□□□□□ -2.37
UBR4Q5T4S7 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.22□□□□□ -2.37
UBR4Q5T4S7 AP003122.6-201ENST00000623831 495 ntBASIC0.22□□□□□ -2.37
UBR4Q5T4S7 RPL7P31-201ENST00000450192 724 ntBASIC0.22□□□□□ -2.37
UBR4Q5T4S7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.22□□□□□ -2.37
UBR4Q5T4S7 Y_RNA.476-201ENST00000384347 108 ntBASIC0.22□□□□□ -2.37
UBR4Q5T4S7 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.22□□□□□ -2.37
UBR4Q5T4S7 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC0.22□□□□□ -2.37
UBR4Q5T4S7 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.22□□□□□ -2.37
UBR4Q5T4S7 AC105224.1-201ENST00000587055 421 ntBASIC0.22□□□□□ -2.37
UBR4Q5T4S7 AC004943.3-201ENST00000624116 600 ntBASIC0.22□□□□□ -2.37
UBR4Q5T4S7 RNA5SP189-201ENST00000364920 115 ntBASIC0.22□□□□□ -2.37
UBR4Q5T4S7 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.22□□□□□ -2.37
UBR4Q5T4S7 AC004908.2-201ENST00000609090 574 ntBASIC0.22□□□□□ -2.37
UBR4Q5T4S7 AC103705.1-201ENST00000619013 241 ntBASIC0.22□□□□□ -2.37
UBR4Q5T4S7 U8.3-201ENST00000363321 132 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 Y_RNA.311-201ENST00000365068 96 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 RNU6-360P-201ENST00000390944 104 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 TRAPPC2P10-201ENST00000415662 323 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 AC114737.2-201ENST00000421583 173 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.21□□□□□ -2.38
UBR4Q5T4S7 AC021146.2-201ENST00000504736 556 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 RNU6ATAC39P-201ENST00000516309 149 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.21□□□□□ -2.38
UBR4Q5T4S7 AC104763.3-201ENST00000613765 618 ntBASIC0.21□□□□□ -2.38
UBR4Q5T4S7 AC008147.4-201ENST00000617570 1204 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms