Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 ASNSP3-201ENST00000451989 1306 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC38Q502W7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CCDC38Q502W7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC38Q502W7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CCDC38Q502W7 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC38Q502W7 RNU6-715P-201ENST00000365204 103 ntBASIC3.41□□□□□ -1.86
CCDC38Q502W7 RNU6-483P-201ENST00000384088 108 ntBASIC3.41□□□□□ -1.86
CCDC38Q502W7 RNU6-1179P-201ENST00000384667 107 ntBASIC3.41□□□□□ -1.86
CCDC38Q502W7 MIR767-201ENST00000390228 109 ntBASIC3.41□□□□□ -1.86
CCDC38Q502W7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CCDC38Q502W7 Y_RNA.623-201ENST00000411128 95 ntBASIC3.41□□□□□ -1.86
CCDC38Q502W7 FCF1P9-201ENST00000412546 282 ntBASIC3.41□□□□□ -1.86
CCDC38Q502W7 GTF2IP20-201ENST00000431663 360 ntBASIC3.41□□□□□ -1.86
CCDC38Q502W7 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC38Q502W7 RPL21P23-201ENST00000446654 460 ntBASIC3.41□□□□□ -1.86
CCDC38Q502W7 HMGB1P30-201ENST00000492455 606 ntBASIC3.41□□□□□ -1.86
CCDC38Q502W7 RPS27P26-201ENST00000494583 239 ntBASIC3.41□□□□□ -1.86
CCDC38Q502W7 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC38Q502W7 MTCO3P9-201ENST00000506989 781 ntBASIC3.41□□□□□ -1.86
CCDC38Q502W7 RNU6-1281P-201ENST00000516223 105 ntBASIC3.41□□□□□ -1.86
CCDC38Q502W7 RNU6-1178P-201ENST00000516674 107 ntBASIC3.41□□□□□ -1.86
CCDC38Q502W7 Y_RNA.704-201ENST00000516851 102 ntBASIC3.41□□□□□ -1.86
CCDC38Q502W7 IGKV2-26-201ENST00000518305 343 ntBASIC3.41□□□□□ -1.86
CCDC38Q502W7 AC026403.1-201ENST00000518938 295 ntBASIC3.41□□□□□ -1.86
CCDC38Q502W7 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC38Q502W7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC38Q502W7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC38Q502W7 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC38Q502W7 AC021739.1-201ENST00000559631 174 ntBASIC3.41□□□□□ -1.86
CCDC38Q502W7 LINC00933-203ENST00000559812 219 ntBASIC3.41□□□□□ -1.86
CCDC38Q502W7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC38Q502W7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC38Q502W7 AL162413.1-201ENST00000603198 110 ntBASIC3.41□□□□□ -1.86
CCDC38Q502W7 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC38Q502W7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC38Q502W7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC38Q502W7 MIR3199-2-201ENST00000636243 86 ntBASIC3.41□□□□□ -1.86
CCDC38Q502W7 MIR1321-201ENST00000637766 79 ntBASIC3.41□□□□□ -1.86
CCDC38Q502W7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CCDC38Q502W7 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CCDC38Q502W7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC38Q502W7 AL356274.2-201ENST00000624379 3752 ntBASIC3.4□□□□□ -1.86
CCDC38Q502W7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.86
CCDC38Q502W7 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.4□□□□□ -1.86
CCDC38Q502W7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC38Q502W7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC38Q502W7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC38Q502W7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC38Q502W7 Z98749.2-208ENST00000381646 500 ntBASIC3.4□□□□□ -1.87
CCDC38Q502W7 RNU6-45P-201ENST00000384471 107 ntBASIC3.4□□□□□ -1.87
CCDC38Q502W7 RNU6-1127P-201ENST00000384580 107 ntBASIC3.4□□□□□ -1.87
CCDC38Q502W7 MIR218-2-201ENST00000385006 110 ntBASIC3.4□□□□□ -1.87
CCDC38Q502W7 RNA5SP44-201ENST00000410446 133 ntBASIC3.4□□□□□ -1.87
CCDC38Q502W7 Y_RNA.599-201ENST00000410489 109 ntBASIC3.4□□□□□ -1.87
CCDC38Q502W7 Y_RNA.619-201ENST00000410951 90 ntBASIC3.4□□□□□ -1.87
CCDC38Q502W7 RPS29P4-201ENST00000414733 161 ntBASIC3.4□□□□□ -1.87
CCDC38Q502W7 AL645937.1-202ENST00000421799 937 ntBASIC3.4□□□□□ -1.87
CCDC38Q502W7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC38Q502W7 AL669831.1-202ENST00000428504 417 ntBASIC3.4□□□□□ -1.87
CCDC38Q502W7 AL627311.1-201ENST00000431514 115 ntBASIC3.4□□□□□ -1.87
CCDC38Q502W7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC38Q502W7 GTF2IP13-201ENST00000438487 386 ntBASIC3.4□□□□□ -1.87
CCDC38Q502W7 PRSS3P4-201ENST00000453323 162 ntBASIC3.4□□□□□ -1.87
CCDC38Q502W7 AL583843.1-201ENST00000456070 346 ntBASIC3.4□□□□□ -1.87
CCDC38Q502W7 SCARNA18-201ENST00000459004 134 ntBASIC3.4□□□□□ -1.87
CCDC38Q502W7 RNU7-180P-201ENST00000459240 63 ntBASIC3.4□□□□□ -1.87
CCDC38Q502W7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC38Q502W7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC38Q502W7 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC38Q502W7 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC38Q502W7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC38Q502W7 AC005476.1-201ENST00000554427 397 ntBASIC3.4□□□□□ -1.87
CCDC38Q502W7 AL451007.1-201ENST00000595491 289 ntBASIC3.4□□□□□ -1.87
CCDC38Q502W7 AL645944.1-201ENST00000603857 493 ntBASIC3.4□□□□□ -1.87
CCDC38Q502W7 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
CCDC38Q502W7 AC010338.1-201ENST00000621823 717 ntBASIC3.4□□□□□ -1.87
CCDC38Q502W7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC38Q502W7 AL353743.1-202ENST00000431724 1695 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC38Q502W7 FAM35CP-201ENST00000554755 2470 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CCDC38Q502W7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 Y_RNA.402-201ENST00000383972 102 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 RNU6-393P-201ENST00000384475 107 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 CIR1P3-201ENST00000405137 479 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 AL606923.1-201ENST00000406616 190 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 BX323014.1-201ENST00000412876 237 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 AL353621.1-201ENST00000418219 243 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC38Q502W7 USP9YP18-201ENST00000425912 695 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC38Q502W7 HMGN2P31-201ENST00000432430 273 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 MTND1P4-201ENST00000435196 415 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 SEPT14P3-201ENST00000439401 183 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC38Q502W7 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC38Q502W7 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC38Q502W7 AL732372.2-207ENST00000445840 183 ntBASIC3.39□□□□□ -1.87
CCDC38Q502W7 SEPT14P2-201ENST00000453405 183 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms