Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.08□□□□□ -2.08
RFX4Q33E94 RNU4-29P-201ENST00000515943 174 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 RNU1-103P-201ENST00000516502 125 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 RNA5SP337-201ENST00000517007 109 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.08□□□□□ -2.08
RFX4Q33E94 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.08□□□□□ -2.08
RFX4Q33E94 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.08□□□□□ -2.08
RFX4Q33E94 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.08□□□□□ -2.08
RFX4Q33E94 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.08□□□□□ -2.08
RFX4Q33E94 MIR3915-201ENST00000578518 97 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 AC006023.1-201ENST00000603944 259 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 AC092354.1-201ENST00000606057 376 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 DUSP12P1-201ENST00000612874 516 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 AC025594.3-201ENST00000613068 790 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.08□□□□□ -2.08
RFX4Q33E94 AL589994.2-201ENST00000621124 579 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.08□□□□□ -2.08
RFX4Q33E94 AP000770.2-201ENST00000623694 100 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.08□□□□□ -2.08
RFX4Q33E94 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
RFX4Q33E94 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RFX4Q33E94 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RFX4Q33E94 AL596028.1-201ENST00000326971 197 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 HSPE1P11-201ENST00000339579 310 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 SNORA38-201ENST00000363946 132 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 RNU4-52P-201ENST00000384209 138 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 MIR634-201ENST00000385208 97 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
RFX4Q33E94 SNORA48.3-201ENST00000391081 134 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 AL021407.1-201ENST00000404531 386 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 RNU2-62P-201ENST00000410868 191 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 TAF9P1-201ENST00000445421 515 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 USP9YP12-201ENST00000450481 570 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.07□□□□□ -2.08
RFX4Q33E94 TAF9P2-201ENST00000454958 515 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.07□□□□□ -2.08
RFX4Q33E94 RNU6-717P-201ENST00000459076 104 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 AC105252.1-201ENST00000503089 286 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 AC010486.2-201ENST00000505572 483 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 SCARNA17.1-201ENST00000516211 143 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 SCARNA17.2-201ENST00000516334 143 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 RPL7P20-201ENST00000520308 745 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.07□□□□□ -2.08
RFX4Q33E94 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.07□□□□□ -2.08
RFX4Q33E94 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.07□□□□□ -2.08
RFX4Q33E94 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.07□□□□□ -2.08
RFX4Q33E94 AC145350.1-201ENST00000567426 208 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.07□□□□□ -2.08
RFX4Q33E94 SNORD53-201ENST00000579969 78 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.07□□□□□ -2.08
RFX4Q33E94 AC112191.3-201ENST00000604371 277 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 AC046143.2-201ENST00000609789 160 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 AC005332.10-201ENST00000612725 619 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.07□□□□□ -2.08
RFX4Q33E94 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.07□□□□□ -2.08
RFX4Q33E94 SCARNA17.4-201ENST00000614296 143 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.07□□□□□ -2.08
RFX4Q33E94 AC009831.4-201ENST00000620744 325 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 AC009878.1-201ENST00000621819 340 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.07□□□□□ -2.08
RFX4Q33E94 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
RFX4Q33E94 AC079416.3-201ENST00000624479 549 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 AC007494.3-201ENST00000624660 743 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 SCARNA15.3-201ENST00000626315 122 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 SCARNA4.1-201ENST00000628597 123 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 AP000553.5-201ENST00000641933 54 ntBASIC2.07□□□□□ -2.08
RFX4Q33E94 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.07□□□□□ -2.08
RFX4Q33E94 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RFX4Q33E94 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RFX4Q33E94 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
RFX4Q33E94 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.06□□□□□ -2.08
RFX4Q33E94 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
RFX4Q33E94 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
RFX4Q33E94 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.06□□□□□ -2.08
RFX4Q33E94 RNU5E-1-201ENST00000362477 120 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 RNU5F-7P-201ENST00000363696 115 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 SNORA3A-201ENST00000364113 130 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
RFX4Q33E94 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
RFX4Q33E94 RPS4XP8-201ENST00000402039 771 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 NDUFS5P4-201ENST00000412983 318 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 AC107081.1-201ENST00000414975 361 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 AC092809.3-201ENST00000415453 231 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.06□□□□□ -2.08
RFX4Q33E94 AL589872.1-201ENST00000426602 288 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
RFX4Q33E94 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.06□□□□□ -2.08
RFX4Q33E94 UBE2D3P4-201ENST00000441973 436 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.06□□□□□ -2.08
RFX4Q33E94 SNORD97-201ENST00000459187 142 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 AP001486.1-201ENST00000463339 476 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 RAP1BP2-201ENST00000478270 544 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
RFX4Q33E94 MTND1P3-201ENST00000484956 952 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 AC234781.5-201ENST00000508429 271 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 AC098591.2-201ENST00000510152 315 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
RFX4Q33E94 FABP5P5-201ENST00000515537 406 ntBASIC2.06□□□□□ -2.08
RFX4Q33E94 RNU6-703P-201ENST00000516946 107 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms