Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SF3B3Q15393 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SF3B3Q15393 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.9□□□□□ -1.78
SF3B3Q15393 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
SF3B3Q15393 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SF3B3Q15393 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SF3B3Q15393 RNU6-1284P-201ENST00000363701 100 ntBASIC3.9□□□□□ -1.79
SF3B3Q15393 Y_RNA.167-201ENST00000363735 109 ntBASIC3.9□□□□□ -1.79
SF3B3Q15393 Y_RNA.373-201ENST00000365600 103 ntBASIC3.9□□□□□ -1.79
SF3B3Q15393 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SF3B3Q15393 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.9□□□□□ -1.79
SF3B3Q15393 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SF3B3Q15393 UBE2V1P2-201ENST00000397758 440 ntBASIC3.9□□□□□ -1.79
SF3B3Q15393 AL590004.1-201ENST00000405321 300 ntBASIC3.9□□□□□ -1.79
SF3B3Q15393 RNU4-65P-201ENST00000410473 140 ntBASIC3.9□□□□□ -1.79
SF3B3Q15393 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.9□□□□□ -1.79
SF3B3Q15393 ARL5AP1-201ENST00000418991 388 ntBASIC3.9□□□□□ -1.79
SF3B3Q15393 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.9□□□□□ -1.79
SF3B3Q15393 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.9□□□□□ -1.79
SF3B3Q15393 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.9□□□□□ -1.79
SF3B3Q15393 CST9LP2-201ENST00000437612 320 ntBASIC3.9□□□□□ -1.79
SF3B3Q15393 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.9□□□□□ -1.79
SF3B3Q15393 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SF3B3Q15393 SNRPFP3-201ENST00000457792 225 ntBASIC3.9□□□□□ -1.79
SF3B3Q15393 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.9□□□□□ -1.79
SF3B3Q15393 RNU7-66P-201ENST00000459469 62 ntBASIC3.9□□□□□ -1.79
SF3B3Q15393 RN7SL330P-201ENST00000469709 307 ntBASIC3.9□□□□□ -1.79
SF3B3Q15393 RPS27AP1-201ENST00000475545 471 ntBASIC3.9□□□□□ -1.79
SF3B3Q15393 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SF3B3Q15393 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.9□□□□□ -1.79
SF3B3Q15393 AC109635.4-202ENST00000531666 412 ntBASIC3.9□□□□□ -1.79
SF3B3Q15393 AP003072.1-201ENST00000531740 145 ntBASIC3.9□□□□□ -1.79
SF3B3Q15393 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SF3B3Q15393 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SF3B3Q15393 MTCO3P13-201ENST00000577757 781 ntBASIC3.9□□□□□ -1.79
SF3B3Q15393 AL022099.1-201ENST00000604551 712 ntBASIC3.9□□□□□ -1.79
SF3B3Q15393 AC099506.2-201ENST00000623074 221 ntBASIC3.9□□□□□ -1.79
SF3B3Q15393 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.9□□□□□ -1.79
SF3B3Q15393 U6.114-201ENST00000636407 96 ntBASIC3.9□□□□□ -1.79
SF3B3Q15393 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.9□□□□□ -1.79
SF3B3Q15393 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
SF3B3Q15393 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
SF3B3Q15393 AL672296.1-201ENST00000427780 2158 ntBASIC3.89□□□□□ -1.79
SF3B3Q15393 Y_RNA.138-201ENST00000363462 102 ntBASIC3.89□□□□□ -1.79
SF3B3Q15393 RNU6-263P-201ENST00000363811 107 ntBASIC3.89□□□□□ -1.79
SF3B3Q15393 Y_RNA.301-201ENST00000364990 103 ntBASIC3.89□□□□□ -1.79
SF3B3Q15393 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
SF3B3Q15393 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SF3B3Q15393 Y_RNA.387-201ENST00000383918 102 ntBASIC3.89□□□□□ -1.79
SF3B3Q15393 Y_RNA.530-201ENST00000384587 101 ntBASIC3.89□□□□□ -1.79
SF3B3Q15393 RPL30P2-201ENST00000414021 291 ntBASIC3.89□□□□□ -1.79
SF3B3Q15393 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.89□□□□□ -1.79
SF3B3Q15393 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.89□□□□□ -1.79
SF3B3Q15393 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.89□□□□□ -1.79
SF3B3Q15393 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.89□□□□□ -1.79
SF3B3Q15393 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.89□□□□□ -1.79
SF3B3Q15393 HMGB3P8-201ENST00000449709 577 ntBASIC3.89□□□□□ -1.79
SF3B3Q15393 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.89□□□□□ -1.79
SF3B3Q15393 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.89□□□□□ -1.79
SF3B3Q15393 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.89□□□□□ -1.79
SF3B3Q15393 snoU13.3-201ENST00000459441 104 ntBASIC3.89□□□□□ -1.79
SF3B3Q15393 RNU6-1208P-201ENST00000459588 107 ntBASIC3.89□□□□□ -1.79
SF3B3Q15393 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.89□□□□□ -1.79
SF3B3Q15393 AC012181.1-201ENST00000479895 423 ntBASIC3.89□□□□□ -1.79
SF3B3Q15393 CCDC34P1-201ENST00000507441 517 ntBASIC3.89□□□□□ -1.79
SF3B3Q15393 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.89□□□□□ -1.79
SF3B3Q15393 AC103783.1-201ENST00000520506 373 ntBASIC3.89□□□□□ -1.79
SF3B3Q15393 HMGN1P28-201ENST00000521340 364 ntBASIC3.89□□□□□ -1.79
SF3B3Q15393 AP005597.4-201ENST00000526762 229 ntBASIC3.89□□□□□ -1.79
SF3B3Q15393 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.89□□□□□ -1.79
SF3B3Q15393 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.89□□□□□ -1.79
SF3B3Q15393 TGIF1P1-201ENST00000558095 802 ntBASIC3.89□□□□□ -1.79
SF3B3Q15393 H3F3AP1-201ENST00000559984 334 ntBASIC3.89□□□□□ -1.79
SF3B3Q15393 uc_338.34-201ENST00000617467 174 ntBASIC3.89□□□□□ -1.79
SF3B3Q15393 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SF3B3Q15393 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SF3B3Q15393 AF117829.1-206ENST00000621883 3802 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SF3B3Q15393 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SF3B3Q15393 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SF3B3Q15393 Y_RNA.162-201ENST00000363683 102 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 Y_RNA.384-201ENST00000383909 102 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 RNU6-629P-201ENST00000384061 103 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 RNU6-1181P-201ENST00000384191 106 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 Y_RNA.500-201ENST00000384466 111 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 SNORD15B-201ENST00000384714 146 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 Y_RNA.576-201ENST00000384781 102 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SF3B3Q15393 AL359634.1-202ENST00000404721 284 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 RPL21P24-201ENST00000413752 448 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 UBE2FP1-201ENST00000416536 447 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 BEND7P1-201ENST00000422058 457 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.88□□□□□ -1.79
SF3B3Q15393 AC236972.2-201ENST00000434979 310 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 PRPS1P1-201ENST00000445305 876 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 GAPDHP27-201ENST00000447427 1020 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.88□□□□□ -1.79
SF3B3Q15393 MRPS31P2-201ENST00000451581 518 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 SNORD19B-201ENST00000459623 84 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms