Protein–RNA interactions for Protein: Q149N8

SHPRH, E3 ubiquitin-protein ligase SHPRH, humanhuman

Predictions only

Length 1,683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRHQ149N8 AC068276.1-201ENST00000605793 379 ntBASIC0.84□□□□□ -2.27
SHPRHQ149N8 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.84□□□□□ -2.28
SHPRHQ149N8 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.84□□□□□ -2.28
SHPRHQ149N8 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.84□□□□□ -2.28
SHPRHQ149N8 AL589880.1-201ENST00000448271 287 ntBASIC0.84□□□□□ -2.28
SHPRHQ149N8 AC004923.2-201ENST00000529649 369 ntBASIC0.84□□□□□ -2.28
SHPRHQ149N8 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.84□□□□□ -2.28
SHPRHQ149N8 CYP2C61P-201ENST00000604072 290 ntBASIC0.84□□□□□ -2.28
SHPRHQ149N8 RNU6-374P-201ENST00000364146 108 ntBASIC0.83□□□□□ -2.28
SHPRHQ149N8 RNU6-1187P-201ENST00000364771 110 ntBASIC0.83□□□□□ -2.28
SHPRHQ149N8 Y_RNA.518-201ENST00000384552 113 ntBASIC0.83□□□□□ -2.28
SHPRHQ149N8 MRPS36P1-201ENST00000421291 307 ntBASIC0.83□□□□□ -2.28
SHPRHQ149N8 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.83□□□□□ -2.28
SHPRHQ149N8 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.83□□□□□ -2.28
SHPRHQ149N8 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.83□□□□□ -2.28
SHPRHQ149N8 AC241584.1-201ENST00000438469 1241 ntBASIC0.83□□□□□ -2.28
SHPRHQ149N8 FGF7P5-201ENST00000441829 291 ntBASIC0.83□□□□□ -2.28
SHPRHQ149N8 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.83□□□□□ -2.28
SHPRHQ149N8 AC023512.1-201ENST00000444513 499 ntBASIC0.83□□□□□ -2.28
SHPRHQ149N8 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.83□□□□□ -2.28
SHPRHQ149N8 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.83□□□□□ -2.28
SHPRHQ149N8 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.83□□□□□ -2.28
SHPRHQ149N8 HMGB1P14-201ENST00000557424 591 ntBASIC0.83□□□□□ -2.28
SHPRHQ149N8 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.83□□□□□ -2.28
SHPRHQ149N8 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.83□□□□□ -2.28
SHPRHQ149N8 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SHPRHQ149N8 HSBP1P2-201ENST00000299671 229 ntBASIC0.82□□□□□ -2.28
SHPRHQ149N8 MTATP6P31-201ENST00000406985 692 ntBASIC0.82□□□□□ -2.28
SHPRHQ149N8 AC093106.2-201ENST00000428212 385 ntBASIC0.82□□□□□ -2.28
SHPRHQ149N8 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC0.82□□□□□ -2.28
SHPRHQ149N8 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.82□□□□□ -2.28
SHPRHQ149N8 RPL39P28-201ENST00000465655 155 ntBASIC0.82□□□□□ -2.28
SHPRHQ149N8 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SHPRHQ149N8 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC0.82□□□□□ -2.28
SHPRHQ149N8 AC024595.1-201ENST00000623088 387 ntBASIC0.82□□□□□ -2.28
SHPRHQ149N8 AP003476.1-201ENST00000623984 516 ntBASIC0.82□□□□□ -2.28
SHPRHQ149N8 AL136313.1-201ENST00000624804 202 ntBASIC0.82□□□□□ -2.28
SHPRHQ149N8 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.82□□□□□ -2.28
SHPRHQ149N8 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.81□□□□□ -2.28
SHPRHQ149N8 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.81□□□□□ -2.28
SHPRHQ149N8 AC104057.1-201ENST00000515547 497 ntBASIC0.81□□□□□ -2.28
SHPRHQ149N8 RNU6-362P-201ENST00000516736 90 ntBASIC0.81□□□□□ -2.28
SHPRHQ149N8 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.81□□□□□ -2.28
SHPRHQ149N8 AL133241.1-201ENST00000556832 487 ntBASIC0.81□□□□□ -2.28
SHPRHQ149N8 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.81□□□□□ -2.28
SHPRHQ149N8 AC068057.2-201ENST00000624047 895 ntBASIC0.81□□□□□ -2.28
SHPRHQ149N8 AC092192.1-201ENST00000633154 1018 ntBASIC0.81□□□□□ -2.28
SHPRHQ149N8 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
SHPRHQ149N8 Y_RNA.390-201ENST00000383932 102 ntBASIC0.81□□□□□ -2.28
SHPRHQ149N8 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
SHPRHQ149N8 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.81□□□□□ -2.28
SHPRHQ149N8 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC0.81□□□□□ -2.28
SHPRHQ149N8 AC004854.1-201ENST00000440356 349 ntBASIC0.81□□□□□ -2.28
SHPRHQ149N8 AC104164.3-201ENST00000467363 1258 ntBASIC0.81□□□□□ -2.28
SHPRHQ149N8 AC147055.4-201ENST00000504399 745 ntBASIC0.81□□□□□ -2.28
SHPRHQ149N8 AF213884.2-201ENST00000510417 903 ntBASIC0.81□□□□□ -2.28
SHPRHQ149N8 SNORA62.5-201ENST00000516634 120 ntBASIC0.81□□□□□ -2.28
SHPRHQ149N8 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.81□□□□□ -2.28
SHPRHQ149N8 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.81□□□□□ -2.28
SHPRHQ149N8 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.81□□□□□ -2.28
SHPRHQ149N8 AC074051.3-201ENST00000570238 358 ntBASIC0.81□□□□□ -2.28
SHPRHQ149N8 BNIP3P25-201ENST00000596023 559 ntBASIC0.81□□□□□ -2.28
SHPRHQ149N8 AC016925.2-201ENST00000605108 242 ntBASIC0.81□□□□□ -2.28
SHPRHQ149N8 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.81□□□□□ -2.28
SHPRHQ149N8 Z69720.2-201ENST00000624755 279 ntBASIC0.81□□□□□ -2.28
SHPRHQ149N8 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
SHPRHQ149N8 RNU6-418P-201ENST00000384035 107 ntBASIC0.8□□□□□ -2.28
SHPRHQ149N8 AC079448.1-201ENST00000449377 373 ntBASIC0.8□□□□□ -2.28
SHPRHQ149N8 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SHPRHQ149N8 ANKRD36BP2-206ENST00000575193 1245 ntBASIC0.8□□□□□ -2.28
SHPRHQ149N8 MIR6759-201ENST00000638110 65 ntBASIC0.8□□□□□ -2.28
SHPRHQ149N8 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SHPRHQ149N8 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.79□□□□□ -2.28
SHPRHQ149N8 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.79□□□□□ -2.28
SHPRHQ149N8 AC104629.2-201ENST00000468627 598 ntBASIC0.79□□□□□ -2.28
SHPRHQ149N8 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC0.79□□□□□ -2.28
SHPRHQ149N8 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.79□□□□□ -2.28
SHPRHQ149N8 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.79□□□□□ -2.28
SHPRHQ149N8 AC008443.7-201ENST00000622195 246 ntBASIC0.79□□□□□ -2.28
SHPRHQ149N8 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC0.78□□□□□ -2.28
SHPRHQ149N8 AC019070.1-201ENST00000415008 1024 ntBASIC0.78□□□□□ -2.28
SHPRHQ149N8 AC245047.4-201ENST00000433189 144 ntBASIC0.78□□□□□ -2.28
SHPRHQ149N8 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.78□□□□□ -2.28
SHPRHQ149N8 OR5B19P-201ENST00000531766 928 ntBASIC0.78□□□□□ -2.28
SHPRHQ149N8 AL355802.3-201ENST00000607571 545 ntBASIC0.78□□□□□ -2.28
SHPRHQ149N8 AL590410.1-201ENST00000617925 333 ntBASIC0.78□□□□□ -2.28
SHPRHQ149N8 FRG1HP-204ENST00000617940 757 ntBASIC0.78□□□□□ -2.28
SHPRHQ149N8 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.78□□□□□ -2.28
SHPRHQ149N8 RNU6-1035P-201ENST00000384477 107 ntBASIC0.78□□□□□ -2.29
SHPRHQ149N8 SNORA40.19-201ENST00000390846 128 ntBASIC0.78□□□□□ -2.29
SHPRHQ149N8 AL356421.1-201ENST00000403255 413 ntBASIC0.78□□□□□ -2.29
SHPRHQ149N8 AL589655.1-201ENST00000405398 482 ntBASIC0.78□□□□□ -2.29
SHPRHQ149N8 TRAPPC13P1-201ENST00000435991 1062 ntBASIC0.78□□□□□ -2.29
SHPRHQ149N8 PTENP1-201ENST00000447117 1215 ntBASIC0.78□□□□□ -2.29
SHPRHQ149N8 SNORA44.1-201ENST00000517031 108 ntBASIC0.78□□□□□ -2.29
SHPRHQ149N8 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.78□□□□□ -2.29
SHPRHQ149N8 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.78□□□□□ -2.29
SHPRHQ149N8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.78□□□□□ -2.29
SHPRHQ149N8 AP003400.5-201ENST00000624827 617 ntBASIC0.78□□□□□ -2.29
SHPRHQ149N8 MIR7157-201ENST00000635801 60 ntBASIC0.78□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms