Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 KLKP1-201ENST00000595979 403 ntBASIC4.27□□□□□ -1.73
SSRP1Q08945 AL627309.6-201ENST00000606857 840 ntBASIC4.27□□□□□ -1.73
SSRP1Q08945 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSRP1Q08945 AC090971.5-201ENST00000621102 293 ntBASIC4.27□□□□□ -1.73
SSRP1Q08945 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SSRP1Q08945 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.27□□□□□ -1.73
SSRP1Q08945 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
SSRP1Q08945 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.27□□□□□ -1.73
SSRP1Q08945 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSRP1Q08945 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSRP1Q08945 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSRP1Q08945 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSRP1Q08945 RNU6-217P-201ENST00000384164 104 ntBASIC4.26□□□□□ -1.73
SSRP1Q08945 RNU6-43P-201ENST00000384302 107 ntBASIC4.26□□□□□ -1.73
SSRP1Q08945 Y_RNA.579-201ENST00000390939 94 ntBASIC4.26□□□□□ -1.73
SSRP1Q08945 AC245054.2-201ENST00000415639 319 ntBASIC4.26□□□□□ -1.73
SSRP1Q08945 TMEM167AP1-201ENST00000423409 219 ntBASIC4.26□□□□□ -1.73
SSRP1Q08945 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.26□□□□□ -1.73
SSRP1Q08945 RNU7-152P-201ENST00000458982 64 ntBASIC4.26□□□□□ -1.73
SSRP1Q08945 AC116337.1-201ENST00000509680 687 ntBASIC4.26□□□□□ -1.73
SSRP1Q08945 AC092436.3-201ENST00000511788 257 ntBASIC4.26□□□□□ -1.73
SSRP1Q08945 RNU1-61P-201ENST00000516107 151 ntBASIC4.26□□□□□ -1.73
SSRP1Q08945 RNU6-1016P-201ENST00000516689 94 ntBASIC4.26□□□□□ -1.73
SSRP1Q08945 RNU1-54P-201ENST00000517181 120 ntBASIC4.26□□□□□ -1.73
SSRP1Q08945 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSRP1Q08945 AL163153.1-201ENST00000554223 283 ntBASIC4.26□□□□□ -1.73
SSRP1Q08945 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.26□□□□□ -1.73
SSRP1Q08945 MIR5690-201ENST00000583739 73 ntBASIC4.26□□□□□ -1.73
SSRP1Q08945 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.26□□□□□ -1.73
SSRP1Q08945 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.26□□□□□ -1.73
SSRP1Q08945 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.26□□□□□ -1.73
SSRP1Q08945 MIR6128-201ENST00000615528 109 ntBASIC4.26□□□□□ -1.73
SSRP1Q08945 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.26□□□□□ -1.73
SSRP1Q08945 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.26□□□□□ -1.73
SSRP1Q08945 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSRP1Q08945 FAM35DP-201ENST00000323387 2712 ntBASIC4.26□□□□□ -1.73
SSRP1Q08945 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSRP1Q08945 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SSRP1Q08945 RNU6-1188P-201ENST00000363795 107 ntBASIC4.25□□□□□ -1.73
SSRP1Q08945 RNU6-1329P-201ENST00000365664 107 ntBASIC4.25□□□□□ -1.73
SSRP1Q08945 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSRP1Q08945 U8.11-201ENST00000384699 133 ntBASIC4.25□□□□□ -1.73
SSRP1Q08945 U8.12-201ENST00000384701 133 ntBASIC4.25□□□□□ -1.73
SSRP1Q08945 AL645568.3-201ENST00000433683 316 ntBASIC4.25□□□□□ -1.73
SSRP1Q08945 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.25□□□□□ -1.73
SSRP1Q08945 BRK1P2-201ENST00000442875 223 ntBASIC4.25□□□□□ -1.73
SSRP1Q08945 U8.18-201ENST00000459285 133 ntBASIC4.25□□□□□ -1.73
SSRP1Q08945 RPL21P129-201ENST00000491732 478 ntBASIC4.25□□□□□ -1.73
SSRP1Q08945 FTH1P9-201ENST00000513251 355 ntBASIC4.25□□□□□ -1.73
SSRP1Q08945 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.25□□□□□ -1.73
SSRP1Q08945 AC007991.1-201ENST00000522680 631 ntBASIC4.25□□□□□ -1.73
SSRP1Q08945 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.25□□□□□ -1.73
SSRP1Q08945 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.25□□□□□ -1.73
SSRP1Q08945 AC034105.4-201ENST00000568304 277 ntBASIC4.25□□□□□ -1.73
SSRP1Q08945 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSRP1Q08945 AC244505.7-201ENST00000599675 272 ntBASIC4.25□□□□□ -1.73
SSRP1Q08945 AL645944.1-201ENST00000603857 493 ntBASIC4.25□□□□□ -1.73
SSRP1Q08945 ELOCP5-201ENST00000604924 333 ntBASIC4.25□□□□□ -1.73
SSRP1Q08945 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.25□□□□□ -1.73
SSRP1Q08945 AC098657.3-201ENST00000620434 263 ntBASIC4.25□□□□□ -1.73
SSRP1Q08945 AC027309.3-201ENST00000623419 351 ntBASIC4.25□□□□□ -1.73
SSRP1Q08945 MAPK10-372ENST00000641954 3413 ntBASIC4.25□□□□□ -1.73
SSRP1Q08945 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSRP1Q08945 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSRP1Q08945 AL133383.2-201ENST00000622958 2336 ntBASIC4.24□□□□□ -1.73
SSRP1Q08945 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.24□□□□□ -1.73
SSRP1Q08945 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.24□□□□□ -1.73
SSRP1Q08945 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSRP1Q08945 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSRP1Q08945 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.24□□□□□ -1.73
SSRP1Q08945 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSRP1Q08945 FTLP6-201ENST00000355274 422 ntBASIC4.24□□□□□ -1.73
SSRP1Q08945 SNORD62.1-201ENST00000362541 86 ntBASIC4.24□□□□□ -1.73
SSRP1Q08945 Y_RNA.138-201ENST00000363462 102 ntBASIC4.24□□□□□ -1.73
SSRP1Q08945 RNU6-166P-201ENST00000384371 107 ntBASIC4.24□□□□□ -1.73
SSRP1Q08945 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SSRP1Q08945 MTHFD2P2-201ENST00000407725 247 ntBASIC4.24□□□□□ -1.73
SSRP1Q08945 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
SSRP1Q08945 RNU6-293P-201ENST00000411259 106 ntBASIC4.24□□□□□ -1.73
SSRP1Q08945 RNU6-1304P-201ENST00000411374 106 ntBASIC4.24□□□□□ -1.73
SSRP1Q08945 AC098614.2-201ENST00000426040 255 ntBASIC4.24□□□□□ -1.73
SSRP1Q08945 AC007560.1-201ENST00000426912 237 ntBASIC4.24□□□□□ -1.73
SSRP1Q08945 TOMM20P4-201ENST00000427861 435 ntBASIC4.24□□□□□ -1.73
SSRP1Q08945 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSRP1Q08945 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.24□□□□□ -1.73
SSRP1Q08945 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.24□□□□□ -1.73
SSRP1Q08945 AL078601.1-201ENST00000444542 271 ntBASIC4.24□□□□□ -1.73
SSRP1Q08945 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.24□□□□□ -1.73
SSRP1Q08945 UBE2CP3-201ENST00000502715 450 ntBASIC4.24□□□□□ -1.73
SSRP1Q08945 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSRP1Q08945 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.24□□□□□ -1.73
SSRP1Q08945 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.24□□□□□ -1.73
SSRP1Q08945 RNU6-572P-201ENST00000516724 80 ntBASIC4.24□□□□□ -1.73
SSRP1Q08945 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.24□□□□□ -1.73
SSRP1Q08945 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.24□□□□□ -1.73
SSRP1Q08945 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.24□□□□□ -1.73
SSRP1Q08945 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.24□□□□□ -1.73
SSRP1Q08945 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.24□□□□□ -1.73
SSRP1Q08945 AC124303.1-201ENST00000605703 360 ntBASIC4.24□□□□□ -1.73
SSRP1Q08945 FTX_3.1-201ENST00000610451 147 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms