Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.32□□□□□ -1.88
UBE3AQ05086 DEFB131E-202ENST00000602581 683 ntBASIC3.32□□□□□ -1.88
UBE3AQ05086 U6.99-201ENST00000637524 83 ntBASIC3.32□□□□□ -1.88
UBE3AQ05086 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
UBE3AQ05086 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
UBE3AQ05086 AC091564.4-201ENST00000533934 2194 ntBASIC3.32□□□□□ -1.88
UBE3AQ05086 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.31□□□□□ -1.88
UBE3AQ05086 NACAP2-201ENST00000318548 624 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 RNA5SP139-201ENST00000364340 117 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 RNU6-1027P-201ENST00000383998 107 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 RNU6-1215P-201ENST00000384441 102 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 RNU6-550P-201ENST00000391057 101 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
UBE3AQ05086 RNU6-55P-201ENST00000411092 107 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 RNU6-954P-201ENST00000411355 107 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 RPL7P46-201ENST00000425129 740 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 TIMM9P3-201ENST00000428659 274 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 AC022018.1-201ENST00000430685 241 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 AL139132.1-201ENST00000431587 344 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.31□□□□□ -1.88
UBE3AQ05086 MTND3P21-201ENST00000433774 331 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 BRK1P2-201ENST00000442875 223 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.31□□□□□ -1.88
UBE3AQ05086 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.31□□□□□ -1.88
UBE3AQ05086 MTATP6P7-201ENST00000453315 681 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 AC006539.3-201ENST00000454258 129 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.31□□□□□ -1.88
UBE3AQ05086 AC128713.1-201ENST00000471495 306 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 TRBV1-201ENST00000476502 284 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 AC083906.5-201ENST00000503722 328 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.31□□□□□ -1.88
UBE3AQ05086 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.31□□□□□ -1.88
UBE3AQ05086 RNU6-314P-201ENST00000516574 104 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 RNU6-703P-201ENST00000516946 107 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 AC025755.1-201ENST00000521306 278 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 AC016957.1-201ENST00000534895 309 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 NACAP3-201ENST00000552100 481 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 TRAV37-201ENST00000553906 342 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.31□□□□□ -1.88
UBE3AQ05086 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.31□□□□□ -1.88
UBE3AQ05086 AC008752.3-201ENST00000588113 712 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 AC007938.3-201ENST00000604965 623 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 AC084782.3-201ENST00000612282 578 ntBASIC3.31□□□□□ -1.88
UBE3AQ05086 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.31□□□□□ -1.88
UBE3AQ05086 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
UBE3AQ05086 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBE3AQ05086 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.31□□□□□ -1.88
UBE3AQ05086 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.31□□□□□ -1.88
UBE3AQ05086 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
UBE3AQ05086 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
UBE3AQ05086 MIR22-201ENST00000362190 85 ntBASIC3.3□□□□□ -1.88
UBE3AQ05086 RNU1-105P-201ENST00000363470 161 ntBASIC3.3□□□□□ -1.88
UBE3AQ05086 RNU6-1085P-201ENST00000363576 107 ntBASIC3.3□□□□□ -1.88
UBE3AQ05086 Y_RNA.381-201ENST00000365666 102 ntBASIC3.3□□□□□ -1.88
UBE3AQ05086 Y_RNA.481-201ENST00000384373 102 ntBASIC3.3□□□□□ -1.88
UBE3AQ05086 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
UBE3AQ05086 CALM2P3-201ENST00000400429 449 ntBASIC3.3□□□□□ -1.88
UBE3AQ05086 RNU4-46P-201ENST00000410818 138 ntBASIC3.3□□□□□ -1.88
UBE3AQ05086 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.3□□□□□ -1.88
UBE3AQ05086 AC098614.2-201ENST00000426040 255 ntBASIC3.3□□□□□ -1.88
UBE3AQ05086 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.3□□□□□ -1.88
UBE3AQ05086 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.3□□□□□ -1.88
UBE3AQ05086 AC003071.1-201ENST00000451219 789 ntBASIC3.3□□□□□ -1.88
UBE3AQ05086 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.3□□□□□ -1.88
UBE3AQ05086 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.3□□□□□ -1.88
UBE3AQ05086 AC021205.2-201ENST00000480069 347 ntBASIC3.3□□□□□ -1.88
UBE3AQ05086 RPL9P33-201ENST00000484311 566 ntBASIC3.3□□□□□ -1.88
UBE3AQ05086 AC092436.1-201ENST00000506450 503 ntBASIC3.3□□□□□ -1.88
UBE3AQ05086 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.3□□□□□ -1.88
UBE3AQ05086 RNA5SP367-201ENST00000516557 118 ntBASIC3.3□□□□□ -1.88
UBE3AQ05086 RNU6-572P-201ENST00000516724 80 ntBASIC3.3□□□□□ -1.88
UBE3AQ05086 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.3□□□□□ -1.88
UBE3AQ05086 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.3□□□□□ -1.88
UBE3AQ05086 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.3□□□□□ -1.88
UBE3AQ05086 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.3□□□□□ -1.88
UBE3AQ05086 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.3□□□□□ -1.88
UBE3AQ05086 GTF3AP2-201ENST00000557014 266 ntBASIC3.3□□□□□ -1.88
UBE3AQ05086 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.3□□□□□ -1.88
UBE3AQ05086 MIR548AC-201ENST00000585049 88 ntBASIC3.3□□□□□ -1.88
UBE3AQ05086 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.3□□□□□ -1.88
UBE3AQ05086 AC068790.6-201ENST00000602558 258 ntBASIC3.3□□□□□ -1.88
UBE3AQ05086 AL133393.1-201ENST00000603277 287 ntBASIC3.3□□□□□ -1.88
UBE3AQ05086 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.3□□□□□ -1.88
UBE3AQ05086 AC116312.1-201ENST00000606841 314 ntBASIC3.3□□□□□ -1.88
UBE3AQ05086 AP001330.5-201ENST00000607176 411 ntBASIC3.3□□□□□ -1.88
UBE3AQ05086 AC068792.1-201ENST00000621354 417 ntBASIC3.3□□□□□ -1.88
UBE3AQ05086 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
UBE3AQ05086 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
UBE3AQ05086 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
UBE3AQ05086 MAPK10-362ENST00000641864 4484 ntBASIC3.29□□□□□ -1.88
UBE3AQ05086 AC110491.1-201ENST00000562191 2010 ntBASIC3.29□□□□□ -1.88
UBE3AQ05086 RNU6-996P-201ENST00000365438 107 ntBASIC3.29□□□□□ -1.88
UBE3AQ05086 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.29□□□□□ -1.88
UBE3AQ05086 RNU6-851P-201ENST00000384565 107 ntBASIC3.29□□□□□ -1.88
UBE3AQ05086 RNU6-1158P-201ENST00000391167 107 ntBASIC3.29□□□□□ -1.88
UBE3AQ05086 RNA5SP354-201ENST00000391247 136 ntBASIC3.29□□□□□ -1.88
UBE3AQ05086 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
UBE3AQ05086 RNU2-29P-201ENST00000410423 189 ntBASIC3.29□□□□□ -1.88
UBE3AQ05086 RN7SKP284-201ENST00000411002 343 ntBASIC3.29□□□□□ -1.88
UBE3AQ05086 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms