Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AL161423.1-201ENST00000613700 262 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 MIR5087-201ENST00000635826 76 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.29□□□□□ -2.36
HSPG2P98160 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC0.29□□□□□ -2.36
HSPG2P98160 OR2A41P-201ENST00000473586 105 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.29□□□□□ -2.36
HSPG2P98160 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.29□□□□□ -2.36
HSPG2P98160 AC055764.2-201ENST00000610089 670 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 AL161629.2-201ENST00000615347 275 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.29□□□□□ -2.36
HSPG2P98160 AP003400.5-201ENST00000624827 617 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 RNU6-1251P-201ENST00000364502 107 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 RNU6-185P-201ENST00000384421 107 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 MIR30A-201ENST00000385092 71 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 MRPL35P1-201ENST00000404272 572 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC0.28□□□□□ -2.36
HSPG2P98160 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.28□□□□□ -2.36
HSPG2P98160 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.28□□□□□ -2.36
HSPG2P98160 AL365496.1-201ENST00000426885 215 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 RPL7L1P10-201ENST00000427790 463 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 AC004383.1-201ENST00000438135 289 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 RPL39P29-201ENST00000447779 157 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 ARPC3P5-201ENST00000448802 534 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 snoU109.1-201ENST00000459339 135 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 MTND4LP3-201ENST00000468320 276 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC0.28□□□□□ -2.36
HSPG2P98160 Y_RNA.654-201ENST00000497848 106 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.28□□□□□ -2.36
HSPG2P98160 MIR4493-201ENST00000584016 73 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 AC084373.1-201ENST00000603311 235 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 AC073569.3-201ENST00000619055 682 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.28□□□□□ -2.36
HSPG2P98160 RNU6-1155P-201ENST00000363554 107 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 RSL24D1P8-201ENST00000434442 492 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 AL034418.1-201ENST00000448675 860 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 AP004371.1-201ENST00000525240 214 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 AC022690.1-201ENST00000526681 550 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 AC010615.3-201ENST00000597319 394 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 AP001485.1-201ENST00000604799 199 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 AC009974.1-201ENST00000608881 455 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 AC090132.2-201ENST00000615881 347 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 AL159152.1-201ENST00000635019 2587 ntBASIC0.28□□□□□ -2.36
HSPG2P98160 RNU6-1187P-201ENST00000364771 110 ntBASIC0.28□□□□□ -2.37
HSPG2P98160 RNA5SP240-201ENST00000365355 128 ntBASIC0.28□□□□□ -2.37
HSPG2P98160 RNA5SP63-201ENST00000391225 112 ntBASIC0.28□□□□□ -2.37
HSPG2P98160 AC099677.1-201ENST00000420575 175 ntBASIC0.28□□□□□ -2.37
HSPG2P98160 AC092393.1-201ENST00000439625 742 ntBASIC0.28□□□□□ -2.37
HSPG2P98160 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.28□□□□□ -2.37
HSPG2P98160 ANKRD26P4-201ENST00000455755 950 ntBASIC0.28□□□□□ -2.37
HSPG2P98160 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.28□□□□□ -2.37
HSPG2P98160 AC108120.2-201ENST00000512973 294 ntBASIC0.28□□□□□ -2.37
HSPG2P98160 RNU4-57P-201ENST00000515980 135 ntBASIC0.28□□□□□ -2.37
HSPG2P98160 RN7SKP277-201ENST00000516895 283 ntBASIC0.28□□□□□ -2.37
HSPG2P98160 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.28□□□□□ -2.37
HSPG2P98160 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.28□□□□□ -2.37
HSPG2P98160 FRG1HP-204ENST00000617940 757 ntBASIC0.28□□□□□ -2.37
HSPG2P98160 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.27□□□□□ -2.37
HSPG2P98160 RPL37P10-201ENST00000412884 288 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 AL356320.2-201ENST00000417263 507 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.27□□□□□ -2.37
HSPG2P98160 UBE2D3P2-201ENST00000424409 445 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 AL157398.1-201ENST00000452981 186 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 AL359385.1-201ENST00000456509 365 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 AC067940.1-201ENST00000458411 300 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 snoU13.4-201ENST00000458916 104 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC0.27□□□□□ -2.37
HSPG2P98160 AC118273.2-201ENST00000532092 465 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.27□□□□□ -2.37
HSPG2P98160 AC040174.2-201ENST00000602701 465 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 AC079395.3-201ENST00000615161 484 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 RNU5D-1-201ENST00000363299 116 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 SNORA68.1-201ENST00000364537 132 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 MIR518A2-201ENST00000384966 87 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.27□□□□□ -2.37
HSPG2P98160 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.27□□□□□ -2.37
HSPG2P98160 AC107626.1-201ENST00000471084 183 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.27□□□□□ -2.37
HSPG2P98160 RNU7-193P-201ENST00000516723 65 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 AP005639.2-201ENST00000527592 928 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 AC006518.2-201ENST00000542513 940 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 AL450336.1-201ENST00000605180 586 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 SNORA8-201ENST00000384574 139 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 MT-TQ-201ENST00000387372 72 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 MTCO1P3-201ENST00000429327 192 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.27□□□□□ -2.37
HSPG2P98160 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.27□□□□□ -2.37
HSPG2P98160 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.27□□□□□ -2.37
HSPG2P98160 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.27□□□□□ -2.37
HSPG2P98160 MIR5571-201ENST00000577998 113 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 AL357075.2-201ENST00000614906 189 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 RNU6-532P-201ENST00000384318 107 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 MIR146A-201ENST00000385201 99 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 MIR767-201ENST00000390228 109 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 AC006461.1-201ENST00000412637 326 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.27□□□□□ -2.37
HSPG2P98160 snoU13.7-201ENST00000459220 104 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.27□□□□□ -2.37
HSPG2P98160 SNORA14.1-201ENST00000516113 141 ntBASIC0.27□□□□□ -2.37
HSPG2P98160 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.27□□□□□ -2.37
HSPG2P98160 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms