Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
ABCA4P78363 MTCO1P18-201ENST00000455518 1419 ntBASIC0.93□□□□□ -2.26
ABCA4P78363 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.93□□□□□ -2.26
ABCA4P78363 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
ABCA4P78363 RNU6-543P-201ENST00000362576 108 ntBASIC0.93□□□□□ -2.26
ABCA4P78363 RNU5A-1-201ENST00000362698 116 ntBASIC0.93□□□□□ -2.26
ABCA4P78363 OR1L1-202ENST00000373686 1083 ntBASIC0.93□□□□□ -2.26
ABCA4P78363 RNU6-955P-201ENST00000410497 104 ntBASIC0.93□□□□□ -2.26
ABCA4P78363 RPS20P15-201ENST00000412792 311 ntBASIC0.93□□□□□ -2.26
ABCA4P78363 CYCSP48-201ENST00000417124 323 ntBASIC0.93□□□□□ -2.26
ABCA4P78363 NDUFB4P7-201ENST00000423198 363 ntBASIC0.93□□□□□ -2.26
ABCA4P78363 PNRC2P1-201ENST00000423940 420 ntBASIC0.93□□□□□ -2.26
ABCA4P78363 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.93□□□□□ -2.26
ABCA4P78363 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.93□□□□□ -2.26
ABCA4P78363 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
ABCA4P78363 AP003066.2-201ENST00000529375 555 ntBASIC0.93□□□□□ -2.26
ABCA4P78363 CBX3P8-201ENST00000532412 525 ntBASIC0.93□□□□□ -2.26
ABCA4P78363 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.93□□□□□ -2.26
ABCA4P78363 AC012435.1-202ENST00000568772 240 ntBASIC0.93□□□□□ -2.26
ABCA4P78363 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.93□□□□□ -2.26
ABCA4P78363 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
ABCA4P78363 ZNF849P-201ENST00000594711 1566 ntBASIC0.93□□□□□ -2.26
ABCA4P78363 RNU6-492P-201ENST00000363035 104 ntBASIC0.92□□□□□ -2.26
ABCA4P78363 RNU6-19P-201ENST00000384718 107 ntBASIC0.92□□□□□ -2.26
ABCA4P78363 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.92□□□□□ -2.26
ABCA4P78363 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.92□□□□□ -2.26
ABCA4P78363 CBX3P6-201ENST00000430257 527 ntBASIC0.92□□□□□ -2.26
ABCA4P78363 MTCO1P53-201ENST00000441633 699 ntBASIC0.92□□□□□ -2.26
ABCA4P78363 AL592447.1-201ENST00000447592 540 ntBASIC0.92□□□□□ -2.26
ABCA4P78363 COX7A2P2-201ENST00000505291 250 ntBASIC0.92□□□□□ -2.26
ABCA4P78363 SMURF2P1-201ENST00000514992 481 ntBASIC0.92□□□□□ -2.26
ABCA4P78363 SNORA31.6-201ENST00000516241 130 ntBASIC0.92□□□□□ -2.26
ABCA4P78363 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.92□□□□□ -2.26
ABCA4P78363 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.92□□□□□ -2.26
ABCA4P78363 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.92□□□□□ -2.26
ABCA4P78363 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.92□□□□□ -2.26
ABCA4P78363 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC0.92□□□□□ -2.26
ABCA4P78363 AC040174.2-201ENST00000602701 465 ntBASIC0.92□□□□□ -2.26
ABCA4P78363 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.92□□□□□ -2.26
ABCA4P78363 MIR676-201ENST00000390702 67 ntBASIC0.92□□□□□ -2.26
ABCA4P78363 USP9YP19-201ENST00000412165 485 ntBASIC0.92□□□□□ -2.26
ABCA4P78363 USP9YP13-201ENST00000417797 480 ntBASIC0.92□□□□□ -2.26
ABCA4P78363 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.92□□□□□ -2.26
ABCA4P78363 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.92□□□□□ -2.26
ABCA4P78363 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.92□□□□□ -2.26
ABCA4P78363 SNORA44.1-201ENST00000517031 108 ntBASIC0.92□□□□□ -2.26
ABCA4P78363 MIR4299-201ENST00000577899 72 ntBASIC0.92□□□□□ -2.26
ABCA4P78363 VN1R88P-201ENST00000596787 292 ntBASIC0.92□□□□□ -2.26
ABCA4P78363 DUXAP11-201ENST00000603858 526 ntBASIC0.92□□□□□ -2.26
ABCA4P78363 AL020996.3-201ENST00000606617 222 ntBASIC0.92□□□□□ -2.26
ABCA4P78363 ZNF663P-202ENST00000641770 1131 ntBASIC0.92□□□□□ -2.26
ABCA4P78363 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.92□□□□□ -2.26
ABCA4P78363 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
ABCA4P78363 ZNF702P-202ENST00000434269 1966 ntBASIC0.92□□□□□ -2.26
ABCA4P78363 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.91□□□□□ -2.26
ABCA4P78363 RPL22P22-201ENST00000395439 379 ntBASIC0.91□□□□□ -2.26
ABCA4P78363 RNU2-47P-201ENST00000410649 186 ntBASIC0.91□□□□□ -2.26
ABCA4P78363 BPY2DP-201ENST00000422208 265 ntBASIC0.91□□□□□ -2.26
ABCA4P78363 RPS29P28-201ENST00000446439 141 ntBASIC0.91□□□□□ -2.26
ABCA4P78363 AC087884.1-201ENST00000469738 328 ntBASIC0.91□□□□□ -2.26
ABCA4P78363 RPL30P12-201ENST00000474666 353 ntBASIC0.91□□□□□ -2.26
ABCA4P78363 RPS23P4-201ENST00000487908 423 ntBASIC0.91□□□□□ -2.26
ABCA4P78363 VN1R107P-201ENST00000601784 209 ntBASIC0.91□□□□□ -2.26
ABCA4P78363 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.91□□□□□ -2.26
ABCA4P78363 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC0.91□□□□□ -2.26
ABCA4P78363 MTND5P25-201ENST00000430499 799 ntBASIC0.91□□□□□ -2.26
ABCA4P78363 AL591212.2-201ENST00000433923 257 ntBASIC0.91□□□□□ -2.26
ABCA4P78363 NANOGP2-201ENST00000435391 727 ntBASIC0.91□□□□□ -2.26
ABCA4P78363 AC117503.1-201ENST00000472241 394 ntBASIC0.91□□□□□ -2.26
ABCA4P78363 BOLA3P3-201ENST00000505182 232 ntBASIC0.91□□□□□ -2.26
ABCA4P78363 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.91□□□□□ -2.26
ABCA4P78363 MTCO1P31-201ENST00000506355 492 ntBASIC0.91□□□□□ -2.26
ABCA4P78363 AC098591.2-201ENST00000510152 315 ntBASIC0.91□□□□□ -2.26
ABCA4P78363 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.91□□□□□ -2.26
ABCA4P78363 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.91□□□□□ -2.26
ABCA4P78363 AC084033.1-201ENST00000550830 633 ntBASIC0.91□□□□□ -2.26
ABCA4P78363 IMMP1LP2-201ENST00000552954 492 ntBASIC0.91□□□□□ -2.26
ABCA4P78363 AC079148.1-201ENST00000565944 819 ntBASIC0.91□□□□□ -2.26
ABCA4P78363 SNORD39.3-201ENST00000584451 71 ntBASIC0.91□□□□□ -2.26
ABCA4P78363 FTX_3.1-201ENST00000610451 147 ntBASIC0.91□□□□□ -2.26
ABCA4P78363 MTCO1P23-201ENST00000415223 1526 ntBASIC0.9□□□□□ -2.26
ABCA4P78363 AC005832.2-201ENST00000538921 1430 ntBASIC0.9□□□□□ -2.26
ABCA4P78363 MIR513A1-201ENST00000385138 129 ntBASIC0.9□□□□□ -2.26
ABCA4P78363 RNA5SP127-201ENST00000411051 133 ntBASIC0.9□□□□□ -2.26
ABCA4P78363 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.9□□□□□ -2.26
ABCA4P78363 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.9□□□□□ -2.26
ABCA4P78363 AL929288.2-201ENST00000446368 407 ntBASIC0.9□□□□□ -2.26
ABCA4P78363 RAD1P2-201ENST00000446414 663 ntBASIC0.9□□□□□ -2.26
ABCA4P78363 AC245102.2-201ENST00000448956 180 ntBASIC0.9□□□□□ -2.26
ABCA4P78363 AL583843.1-201ENST00000456070 346 ntBASIC0.9□□□□□ -2.26
ABCA4P78363 AP1S2P1-201ENST00000457344 379 ntBASIC0.9□□□□□ -2.26
ABCA4P78363 FO393415.2-201ENST00000480085 343 ntBASIC0.9□□□□□ -2.26
ABCA4P78363 RNA5SP121-201ENST00000516537 101 ntBASIC0.9□□□□□ -2.26
ABCA4P78363 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.9□□□□□ -2.26
ABCA4P78363 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.9□□□□□ -2.26
ABCA4P78363 HSBP1P1-201ENST00000555205 166 ntBASIC0.9□□□□□ -2.26
ABCA4P78363 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.9□□□□□ -2.26
ABCA4P78363 AC011939.3-201ENST00000613686 466 ntBASIC0.9□□□□□ -2.26
ABCA4P78363 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.9□□□□□ -2.26
ABCA4P78363 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.9□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms