Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.63□□□□□ -1.99
PEX3P56589 SUMO1P4-201ENST00000429430 302 ntBASIC2.63□□□□□ -1.99
PEX3P56589 AC073614.1-201ENST00000438690 650 ntBASIC2.63□□□□□ -1.99
PEX3P56589 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.63□□□□□ -1.99
PEX3P56589 AL136380.1-201ENST00000447970 162 ntBASIC2.63□□□□□ -1.99
PEX3P56589 MTND1P27-201ENST00000451117 902 ntBASIC2.63□□□□□ -1.99
PEX3P56589 FABP5P15-201ENST00000453566 214 ntBASIC2.63□□□□□ -1.99
PEX3P56589 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.63□□□□□ -1.99
PEX3P56589 SEM1P1-201ENST00000506694 209 ntBASIC2.63□□□□□ -1.99
PEX3P56589 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.63□□□□□ -1.99
PEX3P56589 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.63□□□□□ -1.99
PEX3P56589 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.63□□□□□ -1.99
PEX3P56589 SCARNA24.1-201ENST00000516465 137 ntBASIC2.63□□□□□ -1.99
PEX3P56589 MTCO2P4-201ENST00000517968 247 ntBASIC2.63□□□□□ -1.99
PEX3P56589 AP003122.3-201ENST00000526316 255 ntBASIC2.63□□□□□ -1.99
PEX3P56589 ATP5F1P5-201ENST00000526403 760 ntBASIC2.63□□□□□ -1.99
PEX3P56589 OR5BN1P-201ENST00000532955 829 ntBASIC2.63□□□□□ -1.99
PEX3P56589 DNAJC8P1-201ENST00000554535 372 ntBASIC2.63□□□□□ -1.99
PEX3P56589 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.63□□□□□ -1.99
PEX3P56589 AC012213.3-201ENST00000577199 777 ntBASIC2.63□□□□□ -1.99
PEX3P56589 MIR3611-201ENST00000584484 83 ntBASIC2.63□□□□□ -1.99
PEX3P56589 AC098826.3-201ENST00000603823 466 ntBASIC2.63□□□□□ -1.99
PEX3P56589 AL049779.4-201ENST00000604500 156 ntBASIC2.63□□□□□ -1.99
PEX3P56589 AL136363.1-201ENST00000605349 337 ntBASIC2.63□□□□□ -1.99
PEX3P56589 AC103810.6-201ENST00000606708 136 ntBASIC2.63□□□□□ -1.99
PEX3P56589 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
PEX3P56589 AL589743.7-201ENST00000612637 233 ntBASIC2.63□□□□□ -1.99
PEX3P56589 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.63□□□□□ -1.99
PEX3P56589 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.63□□□□□ -1.99
PEX3P56589 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PEX3P56589 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PEX3P56589 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
PEX3P56589 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PEX3P56589 RNU6-1167P-201ENST00000363227 94 ntBASIC2.62□□□□□ -1.99
PEX3P56589 RNU6-188P-201ENST00000364207 107 ntBASIC2.62□□□□□ -1.99
PEX3P56589 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PEX3P56589 SNORA20.2-201ENST00000383922 131 ntBASIC2.62□□□□□ -1.99
PEX3P56589 RNU6-1027P-201ENST00000383998 107 ntBASIC2.62□□□□□ -1.99
PEX3P56589 FO393413.1-201ENST00000402892 195 ntBASIC2.62□□□□□ -1.99
PEX3P56589 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.62□□□□□ -1.99
PEX3P56589 ELOCP4-201ENST00000420090 333 ntBASIC2.62□□□□□ -1.99
PEX3P56589 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.62□□□□□ -1.99
PEX3P56589 ISCA1P6-201ENST00000427740 390 ntBASIC2.62□□□□□ -1.99
PEX3P56589 MED13P1-201ENST00000428342 171 ntBASIC2.62□□□□□ -1.99
PEX3P56589 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.62□□□□□ -1.99
PEX3P56589 RPL31P35-201ENST00000431058 377 ntBASIC2.62□□□□□ -1.99
PEX3P56589 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.62□□□□□ -1.99
PEX3P56589 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.62□□□□□ -1.99
PEX3P56589 AC007182.2-201ENST00000489251 402 ntBASIC2.62□□□□□ -1.99
PEX3P56589 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.62□□□□□ -1.99
PEX3P56589 MTCO3P7-201ENST00000510008 774 ntBASIC2.62□□□□□ -1.99
PEX3P56589 AC091133.4-201ENST00000511142 308 ntBASIC2.62□□□□□ -1.99
PEX3P56589 RNU7-51P-201ENST00000516560 62 ntBASIC2.62□□□□□ -1.99
PEX3P56589 RNU6-928P-201ENST00000516876 104 ntBASIC2.62□□□□□ -1.99
PEX3P56589 AP000867.2-201ENST00000532468 320 ntBASIC2.62□□□□□ -1.99
PEX3P56589 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PEX3P56589 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.62□□□□□ -1.99
PEX3P56589 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.62□□□□□ -1.99
PEX3P56589 AC024619.4-201ENST00000580924 316 ntBASIC2.62□□□□□ -1.99
PEX3P56589 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PEX3P56589 AL365204.3-201ENST00000612448 685 ntBASIC2.62□□□□□ -1.99
PEX3P56589 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.62□□□□□ -1.99
PEX3P56589 AC110994.2-201ENST00000635481 492 ntBASIC2.62□□□□□ -1.99
PEX3P56589 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
PEX3P56589 AC016717.2-201ENST00000609089 5141 ntBASIC2.62□□□□□ -1.99
PEX3P56589 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
PEX3P56589 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PEX3P56589 MIR21-201ENST00000362134 72 ntBASIC2.61□□□□□ -1.99
PEX3P56589 Y_RNA.194-201ENST00000363985 102 ntBASIC2.61□□□□□ -1.99
PEX3P56589 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.61□□□□□ -1.99
PEX3P56589 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.61□□□□□ -1.99
PEX3P56589 ELOCP14-201ENST00000428070 331 ntBASIC2.61□□□□□ -1.99
PEX3P56589 AC007919.1-201ENST00000429380 217 ntBASIC2.61□□□□□ -1.99
PEX3P56589 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.61□□□□□ -1.99
PEX3P56589 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.61□□□□□ -1.99
PEX3P56589 AL714022.1-201ENST00000439897 151 ntBASIC2.61□□□□□ -1.99
PEX3P56589 ELOCP7-201ENST00000439968 331 ntBASIC2.61□□□□□ -1.99
PEX3P56589 NEFMP1-201ENST00000443423 1006 ntBASIC2.61□□□□□ -1.99
PEX3P56589 EEF1B2P7-201ENST00000451177 676 ntBASIC2.61□□□□□ -1.99
PEX3P56589 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.61□□□□□ -1.99
PEX3P56589 AL160314.1-201ENST00000490836 438 ntBASIC2.61□□□□□ -1.99
PEX3P56589 RPS27P27-201ENST00000498779 255 ntBASIC2.61□□□□□ -1.99
PEX3P56589 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.61□□□□□ -1.99
PEX3P56589 MTND2P33-201ENST00000506452 1031 ntBASIC2.61□□□□□ -1.99
PEX3P56589 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.61□□□□□ -1.99
PEX3P56589 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.61□□□□□ -1.99
PEX3P56589 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.61□□□□□ -1.99
PEX3P56589 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.61□□□□□ -1.99
PEX3P56589 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.61□□□□□ -1.99
PEX3P56589 AC137800.2-201ENST00000574375 120 ntBASIC2.61□□□□□ -1.99
PEX3P56589 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.61□□□□□ -1.99
PEX3P56589 AC060766.3-201ENST00000591442 263 ntBASIC2.61□□□□□ -1.99
PEX3P56589 AC245014.2-201ENST00000603689 287 ntBASIC2.61□□□□□ -1.99
PEX3P56589 AC246785.4-201ENST00000605374 287 ntBASIC2.61□□□□□ -1.99
PEX3P56589 AC067747.1-201ENST00000608026 250 ntBASIC2.61□□□□□ -1.99
PEX3P56589 AC005332.10-201ENST00000612725 619 ntBASIC2.61□□□□□ -1.99
PEX3P56589 AC136475.10-201ENST00000620253 385 ntBASIC2.61□□□□□ -1.99
PEX3P56589 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.61□□□□□ -1.99
PEX3P56589 MTND5P42-201ENST00000637720 498 ntBASIC2.61□□□□□ -1.99
PEX3P56589 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms