Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 CYCSP49-201ENST00000420810 319 ntBASIC0.94□□□□□ -2.26
FOXA3P55318 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.94□□□□□ -2.26
FOXA3P55318 RPS29P28-201ENST00000446439 141 ntBASIC0.94□□□□□ -2.26
FOXA3P55318 PTENP1-201ENST00000447117 1215 ntBASIC0.94□□□□□ -2.26
FOXA3P55318 AL590365.1-201ENST00000450788 243 ntBASIC0.94□□□□□ -2.26
FOXA3P55318 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC0.94□□□□□ -2.26
FOXA3P55318 RPL21P47-201ENST00000483696 477 ntBASIC0.94□□□□□ -2.26
FOXA3P55318 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.94□□□□□ -2.26
FOXA3P55318 OR5B19P-201ENST00000531766 928 ntBASIC0.94□□□□□ -2.26
FOXA3P55318 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC0.94□□□□□ -2.26
FOXA3P55318 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC0.94□□□□□ -2.26
FOXA3P55318 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.94□□□□□ -2.26
FOXA3P55318 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.94□□□□□ -2.26
FOXA3P55318 AC023813.2-201ENST00000564321 469 ntBASIC0.94□□□□□ -2.26
FOXA3P55318 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.94□□□□□ -2.26
FOXA3P55318 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.94□□□□□ -2.26
FOXA3P55318 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.94□□□□□ -2.26
FOXA3P55318 AL035411.2-201ENST00000604022 421 ntBASIC0.94□□□□□ -2.26
FOXA3P55318 AC010900.2-201ENST00000604508 210 ntBASIC0.94□□□□□ -2.26
FOXA3P55318 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.94□□□□□ -2.26
FOXA3P55318 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.94□□□□□ -2.26
FOXA3P55318 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.94□□□□□ -2.26
FOXA3P55318 AC087821.2-201ENST00000637086 450 ntBASIC0.94□□□□□ -2.26
FOXA3P55318 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
FOXA3P55318 RBBP8P1-201ENST00000449447 1844 ntBASIC0.94□□□□□ -2.26
FOXA3P55318 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
FOXA3P55318 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
FOXA3P55318 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
FOXA3P55318 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.93□□□□□ -2.26
FOXA3P55318 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
FOXA3P55318 SNORD115-3-201ENST00000363100 82 ntBASIC0.93□□□□□ -2.26
FOXA3P55318 RNU2-36P-201ENST00000410361 191 ntBASIC0.93□□□□□ -2.26
FOXA3P55318 RNA5SP501-201ENST00000410990 112 ntBASIC0.93□□□□□ -2.26
FOXA3P55318 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.93□□□□□ -2.26
FOXA3P55318 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.93□□□□□ -2.26
FOXA3P55318 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.93□□□□□ -2.26
FOXA3P55318 HMGB3P12-201ENST00000438745 556 ntBASIC0.93□□□□□ -2.26
FOXA3P55318 AC114878.1-201ENST00000441166 358 ntBASIC0.93□□□□□ -2.26
FOXA3P55318 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC0.93□□□□□ -2.26
FOXA3P55318 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.93□□□□□ -2.26
FOXA3P55318 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.93□□□□□ -2.26
FOXA3P55318 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.93□□□□□ -2.26
FOXA3P55318 CECR9-201ENST00000453421 199 ntBASIC0.93□□□□□ -2.26
FOXA3P55318 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.93□□□□□ -2.26
FOXA3P55318 RNU1-123P-201ENST00000458950 160 ntBASIC0.93□□□□□ -2.26
FOXA3P55318 AC132942.1-201ENST00000486753 483 ntBASIC0.93□□□□□ -2.26
FOXA3P55318 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.93□□□□□ -2.26
FOXA3P55318 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.93□□□□□ -2.26
FOXA3P55318 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.93□□□□□ -2.26
FOXA3P55318 AC093677.1-201ENST00000514414 678 ntBASIC0.93□□□□□ -2.26
FOXA3P55318 RNU6-667P-201ENST00000517186 102 ntBASIC0.93□□□□□ -2.26
FOXA3P55318 CYCSP27-201ENST00000527643 293 ntBASIC0.93□□□□□ -2.26
FOXA3P55318 AC125611.1-201ENST00000549563 229 ntBASIC0.93□□□□□ -2.26
FOXA3P55318 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.93□□□□□ -2.26
FOXA3P55318 MIR4666A-201ENST00000580160 79 ntBASIC0.93□□□□□ -2.26
FOXA3P55318 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.93□□□□□ -2.26
FOXA3P55318 AC087045.1-201ENST00000605856 382 ntBASIC0.93□□□□□ -2.26
FOXA3P55318 AL450270.1-201ENST00000606160 391 ntBASIC0.93□□□□□ -2.26
FOXA3P55318 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
FOXA3P55318 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.92□□□□□ -2.26
FOXA3P55318 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
FOXA3P55318 RNU6-1066P-201ENST00000363573 105 ntBASIC0.92□□□□□ -2.26
FOXA3P55318 RNU6-1078P-201ENST00000364522 103 ntBASIC0.92□□□□□ -2.26
FOXA3P55318 RNA5SP190-201ENST00000365222 118 ntBASIC0.92□□□□□ -2.26
FOXA3P55318 MIR518D-201ENST00000385014 87 ntBASIC0.92□□□□□ -2.26
FOXA3P55318 RNU1-78P-201ENST00000391248 165 ntBASIC0.92□□□□□ -2.26
FOXA3P55318 SNORA26.9-201ENST00000391322 122 ntBASIC0.92□□□□□ -2.26
FOXA3P55318 AL590084.1-201ENST00000407885 387 ntBASIC0.92□□□□□ -2.26
FOXA3P55318 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.92□□□□□ -2.26
FOXA3P55318 RNFT1P2-201ENST00000443064 757 ntBASIC0.92□□□□□ -2.26
FOXA3P55318 RPL32P28-201ENST00000443577 397 ntBASIC0.92□□□□□ -2.26
FOXA3P55318 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.92□□□□□ -2.26
FOXA3P55318 RPL39P6-201ENST00000448289 150 ntBASIC0.92□□□□□ -2.26
FOXA3P55318 AC245517.4-201ENST00000448601 281 ntBASIC0.92□□□□□ -2.26
FOXA3P55318 MTND5P8-201ENST00000449817 1083 ntBASIC0.92□□□□□ -2.26
FOXA3P55318 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.92□□□□□ -2.26
FOXA3P55318 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC0.92□□□□□ -2.26
FOXA3P55318 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.92□□□□□ -2.26
FOXA3P55318 AC116337.1-201ENST00000509680 687 ntBASIC0.92□□□□□ -2.26
FOXA3P55318 AC117522.2-201ENST00000510049 657 ntBASIC0.92□□□□□ -2.26
FOXA3P55318 RPL23AP94-201ENST00000512518 302 ntBASIC0.92□□□□□ -2.26
FOXA3P55318 RNU6-703P-201ENST00000516946 107 ntBASIC0.92□□□□□ -2.26
FOXA3P55318 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.92□□□□□ -2.26
FOXA3P55318 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.92□□□□□ -2.26
FOXA3P55318 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.92□□□□□ -2.26
FOXA3P55318 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.92□□□□□ -2.26
FOXA3P55318 MIR4637-201ENST00000582405 84 ntBASIC0.92□□□□□ -2.26
FOXA3P55318 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.92□□□□□ -2.26
FOXA3P55318 CYP2C61P-201ENST00000604072 290 ntBASIC0.92□□□□□ -2.26
FOXA3P55318 AC084824.4-201ENST00000620106 731 ntBASIC0.92□□□□□ -2.26
FOXA3P55318 AC138627.2-201ENST00000624202 601 ntBASIC0.92□□□□□ -2.26
FOXA3P55318 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.92□□□□□ -2.26
FOXA3P55318 AP005901.5-201ENST00000545779 1796 ntBASIC0.92□□□□□ -2.26
FOXA3P55318 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
FOXA3P55318 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
FOXA3P55318 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
FOXA3P55318 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.91□□□□□ -2.26
FOXA3P55318 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
FOXA3P55318 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
FOXA3P55318 RNU6-658P-201ENST00000384606 106 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms