Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 MIR558-201ENST00000384920 94 ntBASIC2.9□□□□□ -1.95
LIMK1P53667 AL512633.1-201ENST00000399931 655 ntBASIC2.9□□□□□ -1.95
LIMK1P53667 BMS1P22-201ENST00000414726 313 ntBASIC2.9□□□□□ -1.95
LIMK1P53667 AC114491.1-201ENST00000416095 246 ntBASIC2.9□□□□□ -1.95
LIMK1P53667 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.9□□□□□ -1.95
LIMK1P53667 GTF2IP20-201ENST00000431663 360 ntBASIC2.9□□□□□ -1.95
LIMK1P53667 AL445687.1-201ENST00000439946 251 ntBASIC2.9□□□□□ -1.95
LIMK1P53667 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.9□□□□□ -1.95
LIMK1P53667 MTCO1P19-201ENST00000443487 500 ntBASIC2.9□□□□□ -1.95
LIMK1P53667 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.9□□□□□ -1.95
LIMK1P53667 snoU13.15-201ENST00000459407 104 ntBASIC2.9□□□□□ -1.95
LIMK1P53667 MTND4P2-201ENST00000507767 1203 ntBASIC2.9□□□□□ -1.95
LIMK1P53667 RNU6-1220P-201ENST00000517126 108 ntBASIC2.9□□□□□ -1.95
LIMK1P53667 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.9□□□□□ -1.95
LIMK1P53667 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
LIMK1P53667 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.9□□□□□ -1.95
LIMK1P53667 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.9□□□□□ -1.95
LIMK1P53667 AC090616.3-201ENST00000582184 217 ntBASIC2.9□□□□□ -1.95
LIMK1P53667 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.9□□□□□ -1.95
LIMK1P53667 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.9□□□□□ -1.95
LIMK1P53667 AC024153.1-201ENST00000603103 365 ntBASIC2.9□□□□□ -1.95
LIMK1P53667 AC015871.2-201ENST00000603605 948 ntBASIC2.9□□□□□ -1.95
LIMK1P53667 AC064859.1-201ENST00000624741 174 ntBASIC2.9□□□□□ -1.95
LIMK1P53667 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LIMK1P53667 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LIMK1P53667 RNU6-169P-201ENST00000365336 107 ntBASIC2.89□□□□□ -1.95
LIMK1P53667 XGY1-201ENST00000381172 446 ntBASIC2.89□□□□□ -1.95
LIMK1P53667 MIR9-1-201ENST00000385198 89 ntBASIC2.89□□□□□ -1.95
LIMK1P53667 AC245054.2-201ENST00000415639 319 ntBASIC2.89□□□□□ -1.95
LIMK1P53667 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.89□□□□□ -1.95
LIMK1P53667 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.89□□□□□ -1.95
LIMK1P53667 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.89□□□□□ -1.95
LIMK1P53667 ISCA1P1-201ENST00000426679 387 ntBASIC2.89□□□□□ -1.95
LIMK1P53667 MED13P1-201ENST00000428342 171 ntBASIC2.89□□□□□ -1.95
LIMK1P53667 RPS20P5-201ENST00000434808 360 ntBASIC2.89□□□□□ -1.95
LIMK1P53667 RPS29P6-201ENST00000438196 145 ntBASIC2.89□□□□□ -1.95
LIMK1P53667 FABP5P15-201ENST00000453566 214 ntBASIC2.89□□□□□ -1.95
LIMK1P53667 AC105252.1-201ENST00000503089 286 ntBASIC2.89□□□□□ -1.95
LIMK1P53667 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.89□□□□□ -1.95
LIMK1P53667 SUMO2P6-201ENST00000505273 288 ntBASIC2.89□□□□□ -1.95
LIMK1P53667 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.89□□□□□ -1.95
LIMK1P53667 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
LIMK1P53667 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.89□□□□□ -1.95
LIMK1P53667 ADI1P3-201ENST00000549509 470 ntBASIC2.89□□□□□ -1.95
LIMK1P53667 CYCSP39-201ENST00000565821 309 ntBASIC2.89□□□□□ -1.95
LIMK1P53667 AC012213.3-201ENST00000577199 777 ntBASIC2.89□□□□□ -1.95
LIMK1P53667 NBR2-204ENST00000587322 63 ntBASIC2.89□□□□□ -1.95
LIMK1P53667 AC098848.2-201ENST00000588023 330 ntBASIC2.89□□□□□ -1.95
LIMK1P53667 DUSP12P1-201ENST00000612874 516 ntBASIC2.89□□□□□ -1.95
LIMK1P53667 AC011939.3-201ENST00000613686 466 ntBASIC2.89□□□□□ -1.95
LIMK1P53667 Z99571.1-201ENST00000636677 394 ntBASIC2.89□□□□□ -1.95
LIMK1P53667 U6.99-201ENST00000637524 83 ntBASIC2.89□□□□□ -1.95
LIMK1P53667 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
LIMK1P53667 AL161431.1-201ENST00000618966 4205 ntBASIC2.88□□□□□ -1.95
LIMK1P53667 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
LIMK1P53667 AL390237.1-201ENST00000404226 1415 ntBASIC2.88□□□□□ -1.95
LIMK1P53667 RN7SKP226-201ENST00000364912 300 ntBASIC2.88□□□□□ -1.95
LIMK1P53667 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.88□□□□□ -1.95
LIMK1P53667 MIR301A-201ENST00000385261 86 ntBASIC2.88□□□□□ -1.95
LIMK1P53667 RNU6-248P-201ENST00000410720 107 ntBASIC2.88□□□□□ -1.95
LIMK1P53667 AC092809.3-201ENST00000415453 231 ntBASIC2.88□□□□□ -1.95
LIMK1P53667 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.88□□□□□ -1.95
LIMK1P53667 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.88□□□□□ -1.95
LIMK1P53667 SUMO1P4-201ENST00000429430 302 ntBASIC2.88□□□□□ -1.95
LIMK1P53667 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.88□□□□□ -1.95
LIMK1P53667 RPL37P4-201ENST00000448908 268 ntBASIC2.88□□□□□ -1.95
LIMK1P53667 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.88□□□□□ -1.95
LIMK1P53667 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.88□□□□□ -1.95
LIMK1P53667 RPL36AP51-201ENST00000487216 318 ntBASIC2.88□□□□□ -1.95
LIMK1P53667 AC139453.3-201ENST00000493276 369 ntBASIC2.88□□□□□ -1.95
LIMK1P53667 AC108078.2-201ENST00000510750 236 ntBASIC2.88□□□□□ -1.95
LIMK1P53667 AC008413.1-201ENST00000511864 177 ntBASIC2.88□□□□□ -1.95
LIMK1P53667 AC109329.2-201ENST00000519658 482 ntBASIC2.88□□□□□ -1.95
LIMK1P53667 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.88□□□□□ -1.95
LIMK1P53667 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.88□□□□□ -1.95
LIMK1P53667 NACAP3-201ENST00000552100 481 ntBASIC2.88□□□□□ -1.95
LIMK1P53667 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.88□□□□□ -1.95
LIMK1P53667 MIR3913-1-201ENST00000577744 102 ntBASIC2.88□□□□□ -1.95
LIMK1P53667 MIR4528-201ENST00000577763 90 ntBASIC2.88□□□□□ -1.95
LIMK1P53667 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LIMK1P53667 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.88□□□□□ -1.95
LIMK1P53667 MIR3117-201ENST00000584034 78 ntBASIC2.88□□□□□ -1.95
LIMK1P53667 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.88□□□□□ -1.95
LIMK1P53667 RSL24D1P11-201ENST00000591045 491 ntBASIC2.88□□□□□ -1.95
LIMK1P53667 AC012119.1-201ENST00000603184 222 ntBASIC2.88□□□□□ -1.95
LIMK1P53667 Z84480.1-201ENST00000605131 311 ntBASIC2.88□□□□□ -1.95
LIMK1P53667 AC098614.4-201ENST00000607601 462 ntBASIC2.88□□□□□ -1.95
LIMK1P53667 AL591516.1-201ENST00000611326 274 ntBASIC2.88□□□□□ -1.95
LIMK1P53667 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.88□□□□□ -1.95
LIMK1P53667 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LIMK1P53667 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
LIMK1P53667 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
LIMK1P53667 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.87□□□□□ -1.95
LIMK1P53667 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LIMK1P53667 MTND4P35-201ENST00000604257 1375 ntBASIC2.87□□□□□ -1.95
LIMK1P53667 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LIMK1P53667 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.87□□□□□ -1.95
LIMK1P53667 RNU6-859P-201ENST00000362728 107 ntBASIC2.87□□□□□ -1.95
LIMK1P53667 RNU1-73P-201ENST00000383971 164 ntBASIC2.87□□□□□ -1.95
LIMK1P53667 RNU6-658P-201ENST00000384606 106 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms