Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NUBP1P53384 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.84□□□□□ -1.47
NUBP1P53384 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.84□□□□□ -1.47
NUBP1P53384 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
NUBP1P53384 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.47
NUBP1P53384 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
NUBP1P53384 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.84□□□□□ -1.47
NUBP1P53384 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
NUBP1P53384 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
NUBP1P53384 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
NUBP1P53384 RNU6-529P-201ENST00000363383 104 ntBASIC5.84□□□□□ -1.47
NUBP1P53384 AL645939.1-201ENST00000453429 797 ntBASIC5.84□□□□□ -1.47
NUBP1P53384 AC010469.1-201ENST00000463864 576 ntBASIC5.84□□□□□ -1.47
NUBP1P53384 HSPE1P18-201ENST00000517602 280 ntBASIC5.84□□□□□ -1.47
NUBP1P53384 AC021678.3-201ENST00000517893 476 ntBASIC5.84□□□□□ -1.47
NUBP1P53384 AC137627.1-201ENST00000545761 289 ntBASIC5.84□□□□□ -1.47
NUBP1P53384 uc_338.18-201ENST00000615451 175 ntBASIC5.84□□□□□ -1.47
NUBP1P53384 MIR7641-1-201ENST00000627518 61 ntBASIC5.84□□□□□ -1.47
NUBP1P53384 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
NUBP1P53384 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
NUBP1P53384 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
NUBP1P53384 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.84□□□□□ -1.48
NUBP1P53384 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NUBP1P53384 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
NUBP1P53384 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC5.83□□□□□ -1.48
NUBP1P53384 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUBP1P53384 SNORA27.1-201ENST00000362604 124 ntBASIC5.83□□□□□ -1.48
NUBP1P53384 RNU6-1010P-201ENST00000362757 107 ntBASIC5.83□□□□□ -1.48
NUBP1P53384 Y_RNA.219-201ENST00000364232 113 ntBASIC5.83□□□□□ -1.48
NUBP1P53384 SNORA7.2-201ENST00000364446 145 ntBASIC5.83□□□□□ -1.48
NUBP1P53384 Y_RNA.323-201ENST00000365157 109 ntBASIC5.83□□□□□ -1.48
NUBP1P53384 MIR488-201ENST00000365739 83 ntBASIC5.83□□□□□ -1.48
NUBP1P53384 Y_RNA.549-201ENST00000384657 102 ntBASIC5.83□□□□□ -1.48
NUBP1P53384 AL355796.1-201ENST00000406706 323 ntBASIC5.83□□□□□ -1.48
NUBP1P53384 U3.36-201ENST00000408418 213 ntBASIC5.83□□□□□ -1.48
NUBP1P53384 RPS3P1-201ENST00000456781 192 ntBASIC5.83□□□□□ -1.48
NUBP1P53384 RPL23AP62-201ENST00000463396 453 ntBASIC5.83□□□□□ -1.48
NUBP1P53384 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC5.83□□□□□ -1.48
NUBP1P53384 RN7SL570P-201ENST00000484405 292 ntBASIC5.83□□□□□ -1.48
NUBP1P53384 COX6CP6-201ENST00000490840 228 ntBASIC5.83□□□□□ -1.48
NUBP1P53384 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.83□□□□□ -1.48
NUBP1P53384 RPS15AP11-201ENST00000594193 385 ntBASIC5.83□□□□□ -1.48
NUBP1P53384 AL020997.2-201ENST00000602607 184 ntBASIC5.83□□□□□ -1.48
NUBP1P53384 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NUBP1P53384 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUBP1P53384 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
NUBP1P53384 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC5.83□□□□□ -1.48
NUBP1P53384 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUBP1P53384 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC5.83□□□□□ -1.48
NUBP1P53384 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
NUBP1P53384 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
NUBP1P53384 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NUBP1P53384 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NUBP1P53384 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NUBP1P53384 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
NUBP1P53384 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
NUBP1P53384 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
NUBP1P53384 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
NUBP1P53384 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.82□□□□□ -1.48
NUBP1P53384 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.82□□□□□ -1.48
NUBP1P53384 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
NUBP1P53384 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NUBP1P53384 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
NUBP1P53384 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUBP1P53384 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC5.82□□□□□ -1.48
NUBP1P53384 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.82□□□□□ -1.48
NUBP1P53384 RNU4-13P-201ENST00000364019 141 ntBASIC5.82□□□□□ -1.48
NUBP1P53384 SNORD78.1-201ENST00000390866 65 ntBASIC5.82□□□□□ -1.48
NUBP1P53384 HSPE1P12-201ENST00000412576 301 ntBASIC5.82□□□□□ -1.48
NUBP1P53384 AL353705.1-201ENST00000433468 480 ntBASIC5.82□□□□□ -1.48
NUBP1P53384 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.82□□□□□ -1.48
NUBP1P53384 RN7SL385P-201ENST00000468873 276 ntBASIC5.82□□□□□ -1.48
NUBP1P53384 SNORA58-201ENST00000505219 137 ntBASIC5.82□□□□□ -1.48
NUBP1P53384 RNU6-113P-201ENST00000516653 101 ntBASIC5.82□□□□□ -1.48
NUBP1P53384 IGHV1-14-201ENST00000523391 241 ntBASIC5.82□□□□□ -1.48
NUBP1P53384 AC126177.5-201ENST00000549599 178 ntBASIC5.82□□□□□ -1.48
NUBP1P53384 MIR3934-201ENST00000579806 107 ntBASIC5.82□□□□□ -1.48
NUBP1P53384 FAM25E-202ENST00000608562 189 ntBASIC5.82□□□□□ -1.48
NUBP1P53384 AL139124.1-201ENST00000609123 421 ntBASIC5.82□□□□□ -1.48
NUBP1P53384 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NUBP1P53384 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NUBP1P53384 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUBP1P53384 AC009962.1-201ENST00000567327 3813 ntBASIC5.82□□□□□ -1.48
NUBP1P53384 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NUBP1P53384 LARS-212ENST00000510191 3737 ntTSL 2 BASIC5.81□□□□□ -1.48
NUBP1P53384 AL353796.1-201ENST00000561542 3241 ntBASIC5.81□□□□□ -1.48
NUBP1P53384 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
NUBP1P53384 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NUBP1P53384 MIR192-201ENST00000384915 110 ntBASIC5.81□□□□□ -1.48
NUBP1P53384 MIR29B2-201ENST00000385055 81 ntBASIC5.81□□□□□ -1.48
NUBP1P53384 AL590004.2-201ENST00000404787 371 ntBASIC5.81□□□□□ -1.48
NUBP1P53384 EIF4A1P3-201ENST00000411521 244 ntBASIC5.81□□□□□ -1.48
NUBP1P53384 AL445584.1-201ENST00000431451 330 ntBASIC5.81□□□□□ -1.48
NUBP1P53384 HMGN2P20-201ENST00000437531 273 ntBASIC5.81□□□□□ -1.48
NUBP1P53384 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC5.81□□□□□ -1.48
NUBP1P53384 AC091153.1-201ENST00000466297 402 ntBASIC5.81□□□□□ -1.48
NUBP1P53384 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
NUBP1P53384 MRPS36P2-201ENST00000512569 299 ntBASIC5.81□□□□□ -1.48
NUBP1P53384 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.81□□□□□ -1.48
NUBP1P53384 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms