Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 AL670379.1-201ENST00000604752 252 ntBASIC2.08□□□□□ -2.08
RFX3P48380 AC018714.1-201ENST00000605028 208 ntBASIC2.08□□□□□ -2.08
RFX3P48380 AL670379.5-201ENST00000605253 252 ntBASIC2.08□□□□□ -2.08
RFX3P48380 AL670379.12-201ENST00000605291 253 ntBASIC2.08□□□□□ -2.08
RFX3P48380 AL670379.8-201ENST00000605353 252 ntBASIC2.08□□□□□ -2.08
RFX3P48380 AL670379.7-201ENST00000605823 252 ntBASIC2.08□□□□□ -2.08
RFX3P48380 FRG1KP-201ENST00000623592 341 ntBASIC2.08□□□□□ -2.08
RFX3P48380 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.08□□□□□ -2.08
RFX3P48380 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.08□□□□□ -2.08
RFX3P48380 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RFX3P48380 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
RFX3P48380 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
RFX3P48380 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
RFX3P48380 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
RFX3P48380 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
RFX3P48380 Y_RNA.46-201ENST00000362695 102 ntBASIC2.07□□□□□ -2.08
RFX3P48380 RNU6-188P-201ENST00000364207 107 ntBASIC2.07□□□□□ -2.08
RFX3P48380 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.07□□□□□ -2.08
RFX3P48380 RNU6-14P-201ENST00000384630 106 ntBASIC2.07□□□□□ -2.08
RFX3P48380 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
RFX3P48380 BTF3P7-201ENST00000407097 488 ntBASIC2.07□□□□□ -2.08
RFX3P48380 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.07□□□□□ -2.08
RFX3P48380 MTND1P23-201ENST00000416931 372 ntBASIC2.07□□□□□ -2.08
RFX3P48380 AC098592.1-201ENST00000419352 333 ntBASIC2.07□□□□□ -2.08
RFX3P48380 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.07□□□□□ -2.08
RFX3P48380 AC003685.2-201ENST00000422795 395 ntBASIC2.07□□□□□ -2.08
RFX3P48380 RPS27AP14-201ENST00000422868 454 ntBASIC2.07□□□□□ -2.08
RFX3P48380 AL353777.1-201ENST00000425552 326 ntBASIC2.07□□□□□ -2.08
RFX3P48380 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.07□□□□□ -2.08
RFX3P48380 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.07□□□□□ -2.08
RFX3P48380 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.07□□□□□ -2.08
RFX3P48380 RPL37P21-201ENST00000435890 276 ntBASIC2.07□□□□□ -2.08
RFX3P48380 PGBD4P3-201ENST00000440731 581 ntBASIC2.07□□□□□ -2.08
RFX3P48380 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.07□□□□□ -2.08
RFX3P48380 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.07□□□□□ -2.08
RFX3P48380 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.07□□□□□ -2.08
RFX3P48380 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.07□□□□□ -2.08
RFX3P48380 TRBV12-1-201ENST00000479785 344 ntBASIC2.07□□□□□ -2.08
RFX3P48380 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.07□□□□□ -2.08
RFX3P48380 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.07□□□□□ -2.08
RFX3P48380 RNU6-581P-201ENST00000516214 105 ntBASIC2.07□□□□□ -2.08
RFX3P48380 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.07□□□□□ -2.08
RFX3P48380 AP006587.4-201ENST00000526053 529 ntBASIC2.07□□□□□ -2.08
RFX3P48380 AP003122.3-201ENST00000526316 255 ntBASIC2.07□□□□□ -2.08
RFX3P48380 AC009063.1-201ENST00000563342 702 ntBASIC2.07□□□□□ -2.08
RFX3P48380 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.07□□□□□ -2.08
RFX3P48380 SNORD53-201ENST00000579969 78 ntBASIC2.07□□□□□ -2.08
RFX3P48380 MIR3146-201ENST00000580367 79 ntBASIC2.07□□□□□ -2.08
RFX3P48380 AC105245.1-201ENST00000581934 244 ntBASIC2.07□□□□□ -2.08
RFX3P48380 MIR5007-201ENST00000583098 95 ntBASIC2.07□□□□□ -2.08
RFX3P48380 AC107214.2-201ENST00000608204 634 ntBASIC2.07□□□□□ -2.08
RFX3P48380 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.07□□□□□ -2.08
RFX3P48380 uc_338.14-201ENST00000613162 166 ntBASIC2.07□□□□□ -2.08
RFX3P48380 AC011939.3-201ENST00000613686 466 ntBASIC2.07□□□□□ -2.08
RFX3P48380 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.07□□□□□ -2.08
RFX3P48380 AC024581.2-201ENST00000619986 252 ntBASIC2.07□□□□□ -2.08
RFX3P48380 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
RFX3P48380 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
RFX3P48380 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.06□□□□□ -2.08
RFX3P48380 AL109809.4-201ENST00000603520 2185 ntBASIC2.06□□□□□ -2.08
RFX3P48380 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
RFX3P48380 MTND5P30-201ENST00000452896 1731 ntBASIC2.06□□□□□ -2.08
RFX3P48380 AL596028.1-201ENST00000326971 197 ntBASIC2.06□□□□□ -2.08
RFX3P48380 XGY1-201ENST00000381172 446 ntBASIC2.06□□□□□ -2.08
RFX3P48380 RNU6-19P-201ENST00000384718 107 ntBASIC2.06□□□□□ -2.08
RFX3P48380 U8.14-201ENST00000390843 143 ntBASIC2.06□□□□□ -2.08
RFX3P48380 RNU6-817P-201ENST00000391083 104 ntBASIC2.06□□□□□ -2.08
RFX3P48380 AL591416.1-201ENST00000404015 867 ntBASIC2.06□□□□□ -2.08
RFX3P48380 U6atac.2-201ENST00000408644 118 ntBASIC2.06□□□□□ -2.08
RFX3P48380 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.06□□□□□ -2.08
RFX3P48380 AC006366.1-201ENST00000422002 759 ntBASIC2.06□□□□□ -2.08
RFX3P48380 RPS3AP44-201ENST00000425466 790 ntBASIC2.06□□□□□ -2.08
RFX3P48380 AL356320.1-201ENST00000429616 163 ntBASIC2.06□□□□□ -2.08
RFX3P48380 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.06□□□□□ -2.08
RFX3P48380 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.06□□□□□ -2.08
RFX3P48380 MTCO1P42-201ENST00000457379 726 ntBASIC2.06□□□□□ -2.08
RFX3P48380 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.06□□□□□ -2.08
RFX3P48380 RNU7-193P-201ENST00000516723 65 ntBASIC2.06□□□□□ -2.08
RFX3P48380 MRPS36P3-201ENST00000519284 130 ntBASIC2.06□□□□□ -2.08
RFX3P48380 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.06□□□□□ -2.08
RFX3P48380 AL133241.1-201ENST00000556832 487 ntBASIC2.06□□□□□ -2.08
RFX3P48380 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.06□□□□□ -2.08
RFX3P48380 AC104984.5-201ENST00000586878 94 ntBASIC2.06□□□□□ -2.08
RFX3P48380 uc_338.12-201ENST00000616344 181 ntBASIC2.06□□□□□ -2.08
RFX3P48380 HSPA8P4-201ENST00000511877 1920 ntBASIC2.06□□□□□ -2.08
RFX3P48380 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
RFX3P48380 AL359854.1-201ENST00000614203 1594 ntBASIC2.06□□□□□ -2.08
RFX3P48380 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.05□□□□□ -2.08
RFX3P48380 SNORA16B-201ENST00000364674 135 ntBASIC2.05□□□□□ -2.08
RFX3P48380 RNA5SP37-201ENST00000365420 130 ntBASIC2.05□□□□□ -2.08
RFX3P48380 RNU1-148P-201ENST00000384472 162 ntBASIC2.05□□□□□ -2.08
RFX3P48380 SNORD23.1-201ENST00000408212 104 ntBASIC2.05□□□□□ -2.08
RFX3P48380 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.05□□□□□ -2.08
RFX3P48380 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.05□□□□□ -2.08
RFX3P48380 RAC1P6-201ENST00000423911 575 ntBASIC2.05□□□□□ -2.08
RFX3P48380 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.05□□□□□ -2.08
RFX3P48380 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.05□□□□□ -2.08
RFX3P48380 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.05□□□□□ -2.08
RFX3P48380 MYL8P-204ENST00000431574 518 ntBASIC2.05□□□□□ -2.08
RFX3P48380 AC018634.1-201ENST00000437554 401 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms