Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CNGA1P29973 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.1□□□□□ -1.75
CNGA1P29973 RNU4-35P-201ENST00000362588 141 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 RNU6-778P-201ENST00000363269 103 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 SNORD6-201ENST00000365444 73 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CNGA1P29973 SNORA40C-201ENST00000391285 128 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 AC022028.1-201ENST00000412054 408 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 RPLP0P7-201ENST00000416050 667 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 HSPE1P1-201ENST00000421494 318 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 AC098614.2-201ENST00000426040 255 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 AC005019.1-201ENST00000436455 431 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CNGA1P29973 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.1□□□□□ -1.75
CNGA1P29973 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.1□□□□□ -1.75
CNGA1P29973 MTND5P20-201ENST00000448677 143 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 NDUFB1P2-201ENST00000449477 176 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.1□□□□□ -1.75
CNGA1P29973 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.1□□□□□ -1.75
CNGA1P29973 PMCHL2-203ENST00000457791 237 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 RNU7-66P-201ENST00000459469 62 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 HMGB1P30-201ENST00000492455 606 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 AC114786.4-201ENST00000508771 728 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 SNORA31.19-201ENST00000517079 126 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.1□□□□□ -1.75
CNGA1P29973 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.1□□□□□ -1.75
CNGA1P29973 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CNGA1P29973 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CNGA1P29973 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.1□□□□□ -1.75
CNGA1P29973 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 H3F3AP1-201ENST00000559984 334 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 AC011712.1-201ENST00000588959 234 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 AC006077.1-201ENST00000604746 343 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 BRDTP1-201ENST00000605735 677 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 AC022306.2-201ENST00000617563 647 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 AC005183.1-201ENST00000603687 1979 ntBASIC4.1□□□□□ -1.75
CNGA1P29973 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CNGA1P29973 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.1□□□□□ -1.75
CNGA1P29973 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CNGA1P29973 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.09□□□□□ -1.75
CNGA1P29973 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CNGA1P29973 RNU1-18P-201ENST00000363062 164 ntBASIC4.09□□□□□ -1.75
CNGA1P29973 RNU6-1303P-201ENST00000364841 107 ntBASIC4.09□□□□□ -1.75
CNGA1P29973 RNU6-867P-201ENST00000364956 107 ntBASIC4.09□□□□□ -1.75
CNGA1P29973 Y_RNA.373-201ENST00000365600 103 ntBASIC4.09□□□□□ -1.75
CNGA1P29973 Y_RNA.530-201ENST00000384587 101 ntBASIC4.09□□□□□ -1.75
CNGA1P29973 U3.19-201ENST00000390893 196 ntBASIC4.09□□□□□ -1.75
CNGA1P29973 AL122016.1-201ENST00000403365 367 ntBASIC4.09□□□□□ -1.75
CNGA1P29973 RNU2-3P-201ENST00000410144 191 ntBASIC4.09□□□□□ -1.75
CNGA1P29973 RPL7P10-201ENST00000417407 739 ntBASIC4.09□□□□□ -1.75
CNGA1P29973 DBIP2-201ENST00000419076 262 ntBASIC4.09□□□□□ -1.75
CNGA1P29973 USP9YP20-201ENST00000419224 558 ntBASIC4.09□□□□□ -1.75
CNGA1P29973 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.09□□□□□ -1.75
CNGA1P29973 RPL23AP82-202ENST00000427528 469 ntBASIC4.09□□□□□ -1.75
CNGA1P29973 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CNGA1P29973 HMGB3P8-201ENST00000449709 577 ntBASIC4.09□□□□□ -1.75
CNGA1P29973 AL136097.1-201ENST00000456945 913 ntBASIC4.09□□□□□ -1.75
CNGA1P29973 AC083904.1-201ENST00000487828 231 ntBASIC4.09□□□□□ -1.75
CNGA1P29973 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.09□□□□□ -1.75
CNGA1P29973 RNU1-86P-201ENST00000516108 154 ntBASIC4.09□□□□□ -1.75
CNGA1P29973 RNU1-107P-201ENST00000516617 154 ntBASIC4.09□□□□□ -1.75
CNGA1P29973 RNU6-572P-201ENST00000516724 80 ntBASIC4.09□□□□□ -1.75
CNGA1P29973 Y_RNA.702-201ENST00000516843 96 ntBASIC4.09□□□□□ -1.75
CNGA1P29973 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.09□□□□□ -1.75
CNGA1P29973 AL355598.1-201ENST00000604169 202 ntBASIC4.09□□□□□ -1.75
CNGA1P29973 AC021646.1-201ENST00000605469 484 ntBASIC4.09□□□□□ -1.75
CNGA1P29973 MIR8057-201ENST00000620957 69 ntBASIC4.09□□□□□ -1.75
CNGA1P29973 AC073308.1-201ENST00000623696 305 ntBASIC4.09□□□□□ -1.75
CNGA1P29973 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.09□□□□□ -1.75
CNGA1P29973 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CNGA1P29973 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.09□□□□□ -1.75
CNGA1P29973 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CNGA1P29973 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CNGA1P29973 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.09□□□□□ -1.76
CNGA1P29973 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.09□□□□□ -1.76
CNGA1P29973 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.09□□□□□ -1.76
CNGA1P29973 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CNGA1P29973 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CNGA1P29973 Y_RNA.480-201ENST00000384364 102 ntBASIC4.08□□□□□ -1.76
CNGA1P29973 RNU6-166P-201ENST00000384371 107 ntBASIC4.08□□□□□ -1.76
CNGA1P29973 HMGN2P8-201ENST00000391458 268 ntBASIC4.08□□□□□ -1.76
CNGA1P29973 EIF4E2P1-201ENST00000393781 255 ntBASIC4.08□□□□□ -1.76
CNGA1P29973 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CNGA1P29973 AL592148.1-201ENST00000413568 445 ntBASIC4.08□□□□□ -1.76
CNGA1P29973 RPL26P27-201ENST00000414397 437 ntBASIC4.08□□□□□ -1.76
CNGA1P29973 CYCSP33-201ENST00000414485 327 ntBASIC4.08□□□□□ -1.76
CNGA1P29973 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.08□□□□□ -1.76
CNGA1P29973 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.08□□□□□ -1.76
CNGA1P29973 HMGN2P30-201ENST00000423237 256 ntBASIC4.08□□□□□ -1.76
CNGA1P29973 SKA2P1-201ENST00000425592 390 ntBASIC4.08□□□□□ -1.76
CNGA1P29973 MTCO3P46-201ENST00000425787 232 ntBASIC4.08□□□□□ -1.76
CNGA1P29973 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.08□□□□□ -1.76
CNGA1P29973 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.08□□□□□ -1.76
CNGA1P29973 U3.44-201ENST00000458938 192 ntBASIC4.08□□□□□ -1.76
CNGA1P29973 AC011005.2-201ENST00000487324 359 ntBASIC4.08□□□□□ -1.76
CNGA1P29973 HMGN1P12-201ENST00000499125 195 ntBASIC4.08□□□□□ -1.76
CNGA1P29973 SNORA14.1-201ENST00000516113 141 ntBASIC4.08□□□□□ -1.76
CNGA1P29973 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.08□□□□□ -1.76
CNGA1P29973 AC090136.1-201ENST00000520009 240 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms