Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC091152.3-201ENST00000604227 325 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 RNU6-85P-201ENST00000605989 107 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 AC012603.1-201ENST00000606424 528 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 U7.8-201ENST00000619968 63 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 UCA1.1-201ENST00000620952 75 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 RMST_7.1-201ENST00000621935 268 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
TNFSF4P23510 ZNF962P-201ENST00000443465 3140 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
TNFSF4P23510 AP003122.5-201ENST00000527668 3766 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TNFSF4P23510 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.32□□□□□ -1.88
TNFSF4P23510 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
TNFSF4P23510 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TNFSF4P23510 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
TNFSF4P23510 TNPO1P3-201ENST00000436471 2662 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TNFSF4P23510 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
TNFSF4P23510 RNU6-37P-201ENST00000362692 107 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 Y_RNA.160-201ENST00000363677 92 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 RNU6-11P-201ENST00000364234 107 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 RNU6-7-201ENST00000364784 107 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 RNU6-8-201ENST00000365467 107 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 RNU6-25P-201ENST00000383873 107 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 RNU6-1-201ENST00000383898 107 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 Y_RNA.414-201ENST00000384011 101 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 RNU6-48P-201ENST00000384161 107 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 RNU6-36P-201ENST00000384172 107 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 RNU6-4P-201ENST00000384205 107 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 RNU6-5P-201ENST00000384238 107 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 RNU6-3P-201ENST00000384314 107 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 RNU6-16P-201ENST00000384385 107 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 RNU6-15P-201ENST00000384534 107 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 RNU6-2-201ENST00000384627 107 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 RNU6-29P-201ENST00000384637 107 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 RNU6-9-201ENST00000384776 107 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 RNU6-33P-201ENST00000384793 107 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 RNU6-510P-201ENST00000391239 108 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.32□□□□□ -1.88
TNFSF4P23510 AL513185.2-201ENST00000425543 193 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.32□□□□□ -1.88
TNFSF4P23510 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.32□□□□□ -1.88
TNFSF4P23510 AC083863.1-201ENST00000438811 231 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.32□□□□□ -1.88
TNFSF4P23510 AC108043.1-201ENST00000512696 574 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 AC010265.1-201ENST00000513509 211 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 ACA59.2-201ENST00000517061 156 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.32□□□□□ -1.88
TNFSF4P23510 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TNFSF4P23510 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.32□□□□□ -1.88
TNFSF4P23510 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.32□□□□□ -1.88
TNFSF4P23510 AC011712.1-201ENST00000588959 234 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.32□□□□□ -1.88
TNFSF4P23510 AC005261.5-201ENST00000596280 355 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 RNU6-6P-201ENST00000606623 107 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.32□□□□□ -1.88
TNFSF4P23510 MIR486-1-201ENST00000612171 68 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 AC011890.2-201ENST00000613393 294 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 AL136221.1-201ENST00000621449 509 ntBASIC3.32□□□□□ -1.88
TNFSF4P23510 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.32□□□□□ -1.88
TNFSF4P23510 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TNFSF4P23510 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TNFSF4P23510 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TNFSF4P23510 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TNFSF4P23510 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TNFSF4P23510 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TNFSF4P23510 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.31□□□□□ -1.88
TNFSF4P23510 ZNF519P1-201ENST00000449011 1626 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 RNU6-942P-201ENST00000363002 107 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 RNU6-748P-201ENST00000384648 107 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 SNORA48.8-201ENST00000391324 134 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 MIR450B-201ENST00000401182 78 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 FTH1P15-201ENST00000406984 280 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 AC009237.5-201ENST00000414271 501 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.31□□□□□ -1.88
TNFSF4P23510 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.31□□□□□ -1.88
TNFSF4P23510 TBCAP1-201ENST00000436520 327 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 OSTCP8-201ENST00000445117 448 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.31□□□□□ -1.88
TNFSF4P23510 MTND3P10-201ENST00000450967 341 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 RNU7-66P-201ENST00000459469 62 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 MRPL42P6-201ENST00000486397 371 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 RN7SL323P-201ENST00000494712 295 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.31□□□□□ -1.88
TNFSF4P23510 AC026726.1-201ENST00000512859 601 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 SNORA43.2-201ENST00000516652 128 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 RNA5SP143-201ENST00000516936 115 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 RN7SKP256-201ENST00000517201 314 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 COPS8P3-201ENST00000526024 482 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.31□□□□□ -1.88
TNFSF4P23510 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.31□□□□□ -1.88
TNFSF4P23510 AC020895.1-201ENST00000595362 272 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 RPL23AP78-201ENST00000599928 470 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 CTHRC1P1-201ENST00000605383 469 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 AC123912.5-201ENST00000605470 343 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.31□□□□□ -1.88
TNFSF4P23510 AC010378.1-201ENST00000619270 362 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.31□□□□□ -1.88
TNFSF4P23510 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms